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cn_combo_scaffold_652_13

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(13185..15692)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 917.0
  • Bit_score: 272
  • Evalue 1.40e-69
TonB-dependent outer membrane transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 790.0
  • Bit_score: 381
  • Evalue 2.40e-102
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 866.0
  • Bit_score: 374
  • Evalue 1.00e-100

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2508
GTGACACCCCCCCGGGGCGCGGCCGCGTCACGGGCGGCGCGCGCGCTCGCGACCGTCGCGCTCGCCGCCGTCTGCGCCACCCCGGCGCTGGGGCAGGAGCGGCTCCTCGCGCGCTCGGATAGCGTGGTCGCCCTGCGGGGCGCCGCGCGCAGCGAGCTCCTGTCCCGCCGTGTCTCCCTGTCGCTGGTCGCCGTCCCCATCGAGCAGGCGCTGCGCGAGATCGCCTCACGCGCCGGGCTTCGCCTCTCCTACAGCTCCGACATCATCCCCGCCGCGCGGCGCGTGAGCGTCTCGCGTGCCGACGTTGCAGCCGGCGACGTGATCGCCGAAGTCCTGCAGGGGACCGACCTCGACGTCGTCGTGAGCCCGTCCGGCTACGTCATCCTCGTGCGCACCCCCGGGCGCCTCCTCCCCAGCGTCGCCTCGCTCTTCTCCGACTCCGCGGCCCGCCTCGGCTCGCCGCTCCGCGTGCGGTCGTCACACCACCGCCCGCAGGTGATGGACCGGATCCTCGTGATGGGGACCCCGGCCACCGGCGCCCCCGAGCGCTCGCTCGCCAGCGCGGTCTCGGTCCTTACGGGGAGCCAGATCGCGCAGAGCGGGGCGACGAGCATGGAGCAGCTCTTCCGCAGCGGGATCCCCGGCGTCGTGTCGTGGGACCTCGGGATCTCCGGACCCTTCGCGCAGATCGGGTCGGTGCGCGGCTCCAGCTCGTTCAGCGCCAACTATCTCAAGACGTACGTCGACGGCGTGGAGCTGGCTTCGCCGTACCTCCTCTTCGCCATCGATCCCTATTCGGTGGAGCGCATCGAGGTCATCCGCGGCCCGCAGGGGTCGGCGCTCTACGGCTCGGACGCCATCAGCGGCGTCGTGCAGGTCGTCACCCGCAAGGGGACCCCCTCCACGGCGTGGCATCCGCAGTTCGACGCGGCCCTGAGCGGCGGGATGATGGAGAGCCGCTTCACCGAGAACGCCAGCGCCATGCAGCACCACTCGGCCATGCTCTCGGCTGGGGGGGCGCGGACGTCGTTAGGCCTGGGGGGGACGTTCGAGGACGTGGGGGCCATCGTCCCCGGCGGCTCGTCGGGGTATCGCGGTACCTTCGGCGGGGCGCGCACCATGCTCGGCCCCCTCCGCCTGGACGCGACCATGCGCTACGCCGACGTGCGCTTCATCGCCCCGTCCAACCCGCTGCTCGGGAGCAATCCCTCCATCGGCACCATCCGCCCGCTCCTCGAGTCGCAGCGCATCGAGAACGAGACCTACGGCCTCACCGCCGACTTCCAGCCGCGCAGCTGGTGGCGGCAGACGCTGGTGCTCGGCCTCGACCGCCACGCGGGGGCCATCGCCCCGCAGCGCGAGCCCGCCACCGTGGCCGACGCCCTCCTCGGCGCCACCAAGGAGAACGTCAGCAAGTCCTCGCTGCGCTACGCGATGGCGCTCCGCCTCGTCGACCGCCCCGGGCTCAGCCTCGGCACCACGTTAGGCGCCGAGCGGAGTGCGCTCCTGCGCGAACGCCTCGGCTTCCGCTCCGACCTGTCGGGGACGGGGACCGGGCTCGCCTCGCTGTACGACGACCAGGTGGACAACACCGGCCTGTTCACGCAGGTGAAGCTGGAGCTGAACGACGCCCTCTTCCTCACCGCCGGGTTGCGCGGCGAGCGCAACTCCAGCTTCGGCGAGAACTACGGCACCGCCTGGGCGCCGATGATGGGAGCCGCCTTCACCCGCGACCTGGGGACGGCCACCGTGAAGCTCCGCGCCGCCTACGGCAAGGGGATCCGCCCCCCGCAGCCTAACGCGAGACGCGCCATCCAGACGCTCGGCTTCCGCCAGGTCGCCAACCCCGAGCTCAGGCCCGAGGTGCAGTCGGGGACCGAGGCGGGGATCGAGCTGTACGTCGGCGACCGCGCCAACCTCTCGCTCACCACCTACAGCCAGACCGCCGACGGGCTCATCCAGCAGGTGGTGGCCAACCAGCGGATGAACGCGCGCACCGTGCAGTTCCAGAACGTCGGCCGCATCCACAACCGCGGCGTCGAGCTGGAGGGGAACGTGCGGCGCGGGGGGCTGCGCGCCGACGTGGCCTTCGCGCTCACCGACTCGCGGGTGCGCGCGCTCTCGCCCAGCTACACCGGCGACCTGCGCCTGGGCGACCGCGTCCCCGAGGTCCCGTCGTCGTCGGGAATGGCCTCGCTCACCTGGGAGACGCGCCGCGTGCGCACCACCGTCGGCACGAACTACATCGGGAGCTGGGTGGGCTACGACTGGCTCGCCTTCTACGGCGGCGAGATGGGGACCGAGGCGTCGCGCCCCGAGCTGCGCAACTACTGGATCGACTATCCGTCGATCACCAAGCCGTTCGTGGGCGTGGGGTACGCGATCGCCCGGGGCGCCGAGTGGTACCTGCGCGTCGACAACCTCACCAACGTGCAGCGCAACGAGCGCGACAACCTGCAGATCACGCAGGGGCGCACCGCCACCGTGGGGCTGCGGCTGGCGCGTTAG
PROTEIN sequence
Length: 836
VTPPRGAAASRAARALATVALAAVCATPALGQERLLARSDSVVALRGAARSELLSRRVSLSLVAVPIEQALREIASRAGLRLSYSSDIIPAARRVSVSRADVAAGDVIAEVLQGTDLDVVVSPSGYVILVRTPGRLLPSVASLFSDSAARLGSPLRVRSSHHRPQVMDRILVMGTPATGAPERSLASAVSVLTGSQIAQSGATSMEQLFRSGIPGVVSWDLGISGPFAQIGSVRGSSSFSANYLKTYVDGVELASPYLLFAIDPYSVERIEVIRGPQGSALYGSDAISGVVQVVTRKGTPSTAWHPQFDAALSGGMMESRFTENASAMQHHSAMLSAGGARTSLGLGGTFEDVGAIVPGGSSGYRGTFGGARTMLGPLRLDATMRYADVRFIAPSNPLLGSNPSIGTIRPLLESQRIENETYGLTADFQPRSWWRQTLVLGLDRHAGAIAPQREPATVADALLGATKENVSKSSLRYAMALRLVDRPGLSLGTTLGAERSALLRERLGFRSDLSGTGTGLASLYDDQVDNTGLFTQVKLELNDALFLTAGLRGERNSSFGENYGTAWAPMMGAAFTRDLGTATVKLRAAYGKGIRPPQPNARRAIQTLGFRQVANPELRPEVQSGTEAGIELYVGDRANLSLTTYSQTADGLIQQVVANQRMNARTVQFQNVGRIHNRGVELEGNVRRGGLRADVAFALTDSRVRALSPSYTGDLRLGDRVPEVPSSSGMASLTWETRRVRTTVGTNYIGSWVGYDWLAFYGGEMGTEASRPELRNYWIDYPSITKPFVGVGYAIARGAEWYLRVDNLTNVQRNERDNLQITQGRTATVGLRLAR*