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cn_combo_scaffold_996_26

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 25657..27936

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 729.0
  • Bit_score: 832
  • Evalue 3.50e-238
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 388.0
  • Bit_score: 473
  • Evalue 1.10e-130
General secretory pathway protein E id=2322390 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 764.0
  • Bit_score: 470
  • Evalue 3.30e-129

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2280
ATGCCGCCGCGCATCATTCGTGACGACTGGCTCCTCCCCACCCTGGAGGGGCTGGTGGACGCGGAGGCCCTCGCCGAACTGCGCCAGCCGAACGTCGAGAGTCTGTGGGACACCGCGACCCGGCGCGGCTTCACGACCGACGACGCCATCCTCCAGGCGCTCTCGGCGCGCTTCCGGATGAAGATCGCCGACCTGTCGACCGCGGGCGCCGAGGCGTGCGAGGCCGTCCCCGAGTCGCTGGCGCGCAAGTACCGCATCGTCCCGTTGCAGGTGACGGACGCGGTGCTCGACATCGCGACCGCCGACCCCCACGACCTCGACTGCGAGCGGACGCTCGGCTTCGCCACCGGGCGAACCATCCGCATGCACCTGGCCGCCCCGTCGCGCCTGGTGGAGCGCATCGACGAGCTGTATCGCCCCGAGAGCTCGGTGGAGAAGCTCCTGGAGGGGATGCACCAGTACGACGTCCAGTCGCTCACCGAGCAGGCCGACTCCGCCGATCTCGACCTCTCGGCCGACAAGGCGTCGGAGCGCCCCATCATCCGGCTGGTCGACCACATCATCGCCGAGGGGATCCAGCAGCGGGCCAGCGACATCCACCTCGAGACGCAGGAGCTGGGGGTACGCGTGCACTATCGCGTCGACGGCGTCCTGCGTCACGCCCTCACGCTCCCCCGCGCGGTCGGCGTCCCGCTCGTCTCGCGCATCAAGATCATCTCCGGGCTCGACATCGCGGATCGCCTTCGCCCGCAGGACGGGCGCGCCCGGGTCTCGGTGGACGGGAAGCGCGTGGACCTGCGCGTCTCGACCCTCCCCGCCTCGGCCGGCGAGAAGGTCGTGATCCGCATCCTCGACTCGAGCAACAACATCCTGTCGTTGGAGAGCCTCGGGGTGTGCGCGGTGGACTTCGAGCGCATCCAGTCGCTGGTCAACCTGCGCGAGGGGATCGTCCTGGTGACCGGCCCGACGGGGTCGGGGAAGACGACCACGCTGTACGCGGCGCTGCGCACCATCCAGACGCGCGGCGTCAACATCGTGACGGTCGAGGACCCGGTGGAGTACAAGCTCGCCGGCGTCGTGCAGGTGCAAGTGAACGAGAAGGCGGGGCTCACCTTCGCCGCGGCGCTCCGGTCCATCCTCCGGCAGGATCCCGACGTCGTCCTCGTCGGCGAGGTGCGCGACCGGGAGACGGCGGGGATCGCGATCCAGGCCTCGCTCACGGGGCACCTCGTCCTGTCCACCCTGCACACCATCGACGCGGCCAGCTCCATCGCGCGGCTGGTCGACATCGGCGTGGAGAGCTACAAGATCGGGGCGGCCCTGAAGGGGGTGGTGGCGCAGCGCCTGGTGCGCCGCCTCTGCCCCGCCTGCCGGGCCCCCATGACCGCCCCCGTCCCCGACCGGGTGCAGCGCTGGCTTCCCGCGGAGACGAAGCTCCAGCGCGCCGTCGGCTGCAACGAATGCGGCGGCACGGGGTATCGCGGGCGCCTGGCCATCATGGAGGTGCTCCTGGTCGATGGCGAGGTGGAGCGGCGCATCGCCGCGGGCGAATCGACGGAGAAGATCGTGGAGGCGGCGCGAACCGGCGGGATGCGCTCCCTCTGGGAGTCGGGGATCGACCACGTGGCGGCGGGCACCACCGACATCGAGGAGCTCCTGCGCGTGGTGGAGGTCCCGCTCGACCAGCCCGTCGTTCGCCGCGAACACCGAGCCGAGCCGCGTCACCTCACGCGCGACTCGGGCTCCCCGGCGGCCGGAACGTCTCGCCCGACGCCGGCTGCGCCCGCCCCGCTCGCCCCGCCGACCCCGGCCCCGGCTCCTCCTCCGCCCTCGTCCCGGGCCGCGTCCATCTTCGGCGACGATGTCCTGGAGTTGGTGGATGACGTCGCCCCCGCCCATCGGCGTGGGGAGAAGGGGACGGTCCTCCTGGTCGAGGACGAGGAGTCGCTGCGCCTGGTGCTGCGCGACCTGCTGGAGCGCGACGGCTTCACGGTGGTCGAGGCCGCCGACGGGATCGCCGCGCTCGACGAGATCGACCGGTCTGCCCCGGATGCCATCGTCCTCGACCTCAATCTCCCTCGCCTCGACGGCTACGGCGTGCTGGCTCGCCTGCGGTCCCGCCCGGGGACGCAGGAGATTCCGATCGTGGTGCTCACCGCCAAGGCGGACGAGGAGAACGAGGTGCGGGTCTTCGAATCGGGGGCCGACGACTTCCTGACCAAGCCATTCAGGCCGAGGGCGCTGACCGCTCGATTGCGCGCCCTGCTACGCCGGAGTTAG
PROTEIN sequence
Length: 760
MPPRIIRDDWLLPTLEGLVDAEALAELRQPNVESLWDTATRRGFTTDDAILQALSARFRMKIADLSTAGAEACEAVPESLARKYRIVPLQVTDAVLDIATADPHDLDCERTLGFATGRTIRMHLAAPSRLVERIDELYRPESSVEKLLEGMHQYDVQSLTEQADSADLDLSADKASERPIIRLVDHIIAEGIQQRASDIHLETQELGVRVHYRVDGVLRHALTLPRAVGVPLVSRIKIISGLDIADRLRPQDGRARVSVDGKRVDLRVSTLPASAGEKVVIRILDSSNNILSLESLGVCAVDFERIQSLVNLREGIVLVTGPTGSGKTTTLYAALRTIQTRGVNIVTVEDPVEYKLAGVVQVQVNEKAGLTFAAALRSILRQDPDVVLVGEVRDRETAGIAIQASLTGHLVLSTLHTIDAASSIARLVDIGVESYKIGAALKGVVAQRLVRRLCPACRAPMTAPVPDRVQRWLPAETKLQRAVGCNECGGTGYRGRLAIMEVLLVDGEVERRIAAGESTEKIVEAARTGGMRSLWESGIDHVAAGTTDIEELLRVVEVPLDQPVVRREHRAEPRHLTRDSGSPAAGTSRPTPAAPAPLAPPTPAPAPPPPSSRAASIFGDDVLELVDDVAPAHRRGEKGTVLLVEDEESLRLVLRDLLERDGFTVVEAADGIAALDEIDRSAPDAIVLDLNLPRLDGYGVLARLRSRPGTQEIPIVVLTAKADEENEVRVFESGADDFLTKPFRPRALTARLRALLRRS*