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cn_combo_scaffold_1193_22

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(14460..15119)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 218.0
  • Bit_score: 389
  • Evalue 1.60e-105
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 218.0
  • Bit_score: 392
  • Evalue 4.60e-106
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 218.0
  • Bit_score: 389
  • Evalue 4.60e-106
  • rbh

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGCCAGAAGACGAATCCGATCGGCTTTCGCCTCGGGATCACGAAGGATTGGCGCTCGCGCTGGTACGCGAACCGTGAGTTCCCGCAGCTGCTGAAGGAGGACGCGCTGCTGCGGAAGTACCTGAAGACGCGCCTGGGGCATGCCGCGATCTCCGACATCCACATCGAACGGAAGCCGGGGAAGGTGGTGGTGACGATCCACACCGGGCGACCGGGGGTGGTGATCGGGAAGAAGGGCGCGGAGGTGGACAAGCTGCGCGACGAGCTGGCGCAACTGACGGGGAAGGAAGTCGGGATCAACGTCGAGGAGATCAAGCGTCCCGAGCTCGACAGCCAGCTGGTGGCGGACAACATCGCGAACCAGCTGTCGCAGCGCATCTCGTTCCGCCGGGCGATGAAGCGGGCGGTGCAGAGCGCGATGCGGATGGGGGCGCAGGGAATCAAGGTGAAGGCGGGGGGCCGCCTGGGCGGCGCGGAGATCGCGCGTGTCGAGGGGTACCACGAGGGGCGCGTGCCGCTGCACACGCTGCGCGCCGACATCGACTACGCCACGTCGACGGCGAAGACCACGTTCGGCACCATCGGGGTGAAGGTGTGGATCTTCAAGGGCGAGGTGGTGGAGGAGCGGCGCGGCAAGACGTATTCGACCGGAGTCTAG
PROTEIN sequence
Length: 220
MGQKTNPIGFRLGITKDWRSRWYANREFPQLLKEDALLRKYLKTRLGHAAISDIHIERKPGKVVVTIHTGRPGVVIGKKGAEVDKLRDELAQLTGKEVGINVEEIKRPELDSQLVADNIANQLSQRISFRRAMKRAVQSAMRMGAQGIKVKAGGRLGGAEIARVEGYHEGRVPLHTLRADIDYATSTAKTTFGTIGVKVWIFKGEVVEERRGKTYSTGV*