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cn_combo_scaffold_1533_10

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(8764..9339)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC29_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 274
  • Evalue 1.10e-70
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 274
  • Evalue 3.20e-71
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH40056.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantia similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 274
  • Evalue 1.60e-70

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGGCAACCGATACCTCCCTCATCCAGCGCGCGATCGACGGAGATGAGCGGGCGATGCGACAGTTGTGGTCGCAGCACGCCCCGCACATCGACGCAGTCGTCCGTCGCCTGGTGGGGAACGCGGACGACGCGGTGGACATCGCACAGGAAGTGTGGATCCAGATCTTCCGCGCGCTCCCCACGTACCGGGGTGACTCGCAGTTCGGGACGTGGGCGCACCGGATCGCGGTGAACCGCACGTTGAACGCGTTGCGGCGCACGCGCCGCCTGGCGAAGCTCGAGACCGACATCGAGGAGGAGACGGCGTCGGTGGAACATGGGAGCGAGCGTGCGTTGCTCGCGGCCTCGATCGAGGAAGCGACGGCCCGCCTCTCGCCGGGGGCGCGCACGGTCTTCGTGATGCACGACGTGGAGGGATACACGCACGAGGAGATCGCCGCCGAGTTGGGGATCACCCCCGGCGGCTCGAAATCCCAACTGTTCAAGGCGCGGGCGCGGCTGCGGAAGCTGCTGGCGCCCGTCATCGAAGGATTCAGCTCAGGGACGGACCGGGAACATGCTGCACCTGCCTATTGA
PROTEIN sequence
Length: 192
MATDTSLIQRAIDGDERAMRQLWSQHAPHIDAVVRRLVGNADDAVDIAQEVWIQIFRALPTYRGDSQFGTWAHRIAVNRTLNALRRTRRLAKLETDIEEETASVEHGSERALLAASIEEATARLSPGARTVFVMHDVEGYTHEEIAAELGITPGGSKSQLFKARARLRKLLAPVIEGFSSGTDREHAAPAY*