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cn_combo_scaffold_2076_5

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 3967..4569

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 200.0
  • Bit_score: 311
  • Evalue 5.20e-82
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 196.0
  • Bit_score: 324
  • Evalue 2.20e-86
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 196.0
  • Bit_score: 324
  • Evalue 1.10e-85

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCCGCCCTCCTCGACCTACGCAACCTCCCAGACGCCGATCTCGTCGCGCTCGCCCAGGAAGGGCGCGAGGCGGCCTACCGGGAACTGGTGCGCCGGTACGAGCGCCCGGTCTTCTCCCTGATCTTCCGCATGGTACGCGACCGCGAGGCCTCCGAGGACCTCGCCCAGGACACGTTCATCAAGGTCCTGAACCACATCGACAAGTACCGTCCCGAGTTCAAGCTCTCGAGCTGGCTCTTCAAGATCGCCAACAACGTGGCGATCGATTACCTGCGCAAGCGCCAGCTGGACACCATCTCCATCGATGGCTCCCCACACGCCCTCTCGGCGGCCGAGGTGGAGGCGACGTCGTTCGACGTCGTGGCGCGCCAGGAATCGGCGCTCGAAGAGATGGAGGCGCGCGAGCTCGGGAGCGCCATCGAGCGGGCCATCCAGGGGCTCCGTCCCGAGTACCGCGCCAGCATCATGCTGCGCCACGTGGAAGGGCGGTCGTACGAGGAGATCGCCGCCACGCTCGACCTGCCATTGGGAACCGTTAAGACCTACATCCACCGCGCCCGGCATCAGCTGCGCGATGCCCTCGAGAGCGTGCGGGAATGA
PROTEIN sequence
Length: 201
MAALLDLRNLPDADLVALAQEGREAAYRELVRRYERPVFSLIFRMVRDREASEDLAQDTFIKVLNHIDKYRPEFKLSSWLFKIANNVAIDYLRKRQLDTISIDGSPHALSAAEVEATSFDVVARQESALEEMEARELGSAIERAIQGLRPEYRASIMLRHVEGRSYEEIAATLDLPLGTVKTYIHRARHQLRDALESVRE*