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cn_combo_scaffold_2940_2

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 2650..3537

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 295.0
  • Bit_score: 546
  • Evalue 1.80e-152
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 295.0
  • Bit_score: 546
  • Evalue 5.20e-153
RNA polymerase sigma factor {ECO:0000313|EMBL:BAH37752.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 295.0
  • Bit_score: 546
  • Evalue 2.60e-152

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 888
ATGACTGAAGTGAAGCGCCGCCGCCGTCGGACGACCCCACAGGGGATCGCGCCGAGCGAGCCGGAGCGCGACATCCTCGATCAGTACCTCTACGAGGTCAGCACCTACCCGCTGCTCAAGGCGGCGGAGGAAATCGAGCTTGCCCGCAAGATCCGCGCGGGCGACCAGGACGCGCTGCAGGAGCTGGTCAAGCGTAACCTCCGTTTCGTGATTTCGGTCGCCAAGAAGTACCAGAACCGTGGCCTCCCCCTCATCGATCTCATCGGGGAAGGGAACGTCGGCCTCCTCACGGCGGCGCGGAAGTTCGACCCGGACCAGGGGGTGAAGTTCATCTCCTACGCTGTGTGGTGGATTCGCCAGGCCATCCTGTCGTCGCTCGCGCGCCAGGGGCGTACCGTGCGCGTCCCCCTGAACCGCACCGCCGACCTGTCGCGCATCATCAAGGCGTCGGAGATCCTCCGCCAGAAGCTGCGGCGCGAGCCCACGCCGGAGGAGTTGGCGCAGCTGACGGGGCTCTCGGTCGACGTCGTGCAGTCGCTCGCCGCGCTCAACACGGGCGACGTGCGCCTCGACGCCCCGATGGATCCGGAAGGCGACCGGGCCCTCATCGAGCGCTTCGTCGCCGACGAGATGCCGGACACCGAGGAAGAGGCGATGAACCGCTTCCTCTCCGACGAGATCGAGCTTGCGTTGTCCACGCTCCCCCCTCGGGACGCGAAGGTCCTCCGCCTGTATTTCGGGCTCGAGGGCGGGCGCGAGCACACGCTCGAGGAGATCGGTTCGATGCTCGGCGTCACGCGCGAGCGCGTGCGCCAGCTGCGCGATCGCGCCCTCAAGCGCCTGCGCGAGGGCGACGTGGGGCGCGCCCTCTCCAGCTTCGCGGCCTGA
PROTEIN sequence
Length: 296
MTEVKRRRRRTTPQGIAPSEPERDILDQYLYEVSTYPLLKAAEEIELARKIRAGDQDALQELVKRNLRFVISVAKKYQNRGLPLIDLIGEGNVGLLTAARKFDPDQGVKFISYAVWWIRQAILSSLARQGRTVRVPLNRTADLSRIIKASEILRQKLRREPTPEELAQLTGLSVDVVQSLAALNTGDVRLDAPMDPEGDRALIERFVADEMPDTEEEAMNRFLSDEIELALSTLPPRDAKVLRLYFGLEGGREHTLEEIGSMLGVTRERVRQLRDRALKRLREGDVGRALSSFAA*