ggKbase home page

Ig9238_scaffold_3379_5

Organism: Ig9238_Hor_167_2016_Betaproteobacteria_67_92

near complete RP 50 / 55 MC: 6 BSCG 51 / 51 MC: 5 ASCG 14 / 38 MC: 4
Location: comp(2771..2974)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspD (CSP-D) Tax=Oxalobacteraceae RepID=A4G7U0_HERAR similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 66.0
  • Bit_score: 110
  • Evalue 5.80e-22
cspD2; cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 66.0
  • Bit_score: 110
  • Evalue 1.70e-22
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 2.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCTACCGGCATCGTGAAATGGTTCAACGACTCCAAGGGTTTCGGTTTCATCACGCCTGACGACGGCGGCAAGGATCTCTTTGCCCACCACACGTCGATCCAGATGGACGGCTACAAGTCCCTCAAGGAAGCGCAGAAGGTGGAATTCGAAGTGCAGTCGGGCCCCAAGGGCCCGTGCGCCGCGAACATTCGCGCGATCTAG
PROTEIN sequence
Length: 68
MATGIVKWFNDSKGFGFITPDDGGKDLFAHHTSIQMDGYKSLKEAQKVEFEVQSGPKGPCAANIRAI*