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Ig9238_scaffold_15563_23

Organism: Ig9238_Hor_167_2016_Betaproteobacteria_67_92

near complete RP 50 / 55 MC: 6 BSCG 51 / 51 MC: 5 ASCG 14 / 38 MC: 4
Location: comp(18650..22051)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 1133.0
  • Bit_score: 1493
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Sulfuricella denitrificans skB26 RepID=S6B477_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 1133.0
  • Bit_score: 1493
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 1133.0
  • Bit_score: 1493
  • Evalue 0.0

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Taxonomy

Sulfuricella denitrificans → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3402
GTGGCAAGGCCCGCGGTCGCCCGCTCGGGTTCCTCCGACGCCCTCTGGATCGCGCTCCTCGCGAGAAGCGCGAAGCCCGTGTTCGTGGTGACGGAGTCTGCGCAGGACGCGGAGCGCCTGCGAGACGAGATCGCGTGGTTCGACCCCGCCCTCGCGGTGCACCGACTGCCGGACTGGGAGACGCTTCCCTACGACCAGTTCTCGCCGCACCCCGACCTTGTCTCGGAACGGCTCGCAGCCCTGCACCGGTTCTCGCAGGGAACCTGCGACGTGGGCCTCATCCCCGTCTCGACGGCGCTGCAGCGCCTGGCGCCGCGCGGCTACCTCGCCGCGCGCACGTTCTTCCTGCGCCAGAACGAGCGTCTCGACCTCGAAGCGCTCAAGTCCCAGCTGGCGCTCGCCGGCTACGCGGCCGTCCAGCAGGTGATGGCGCCCGGCGAGTTCTGCATCCGCGGCGGCCTCGTCGACCTTTTTCCGACGGGTAGCGCGGTTCCGTACCGCCTCGACCTCCTCGACGAGGAGATCGAGTCCGTCCACACTTTCGACGTCGACACCCAGCGCTCCATCTATCCCGTCGCGCAGGTGCGCCTTCTGCCGGCGCGCGAGTTCCCGATGGACGACGAGGGGCGCTCGCGTTTCCGGGCCAATTTCCGCGAACGATTCGAAGGCGACCCGACCAAGCGACGCGCCTACAAGGACGTCTCCAACGGTGTCGCGCCGGCGGGCGTCGAGTGCTACCTGCCCCTCTTCTTCGACGAGACGGCGACTCTCTTCGACTACCTTCCGCCGGACGCGACCTGCGTCCTGCACGAGGACGTTCCGGCCGGTGCGCAGGCGTTCTGGGACGGCCTGAAGGGTCGCTGGGAGCTTCTTCGCGGCGACCGCGACCGGCCGCTCCTGCCGCCGGACCAGCTCTACCTCCCGACCGAGGAGTTCTTCCTCGCCCTGCAGGGGCGGCCCCGCCTCGATGTGAGGCGCGGCTGCGTGGGGCCGGCGCCCGCGAACGCGCCTGTGCTCGTTGCGGCGGAACTGCCCGGCGTGGGTGTCGACCGGCGTTCCGCGGAACCGCTGCGCGCGTTCGAACGATTCGTGTCTTCCTTCGACGGGCGCGTCCTCGTCGTCGCCGACGGCCCGGGCCGCCGCGAGACGCTCGCGCAGTTCTTCGCGGAGCATGGCCTGCACCCGGCCCTGTGCGACGACTGGACGCGGTTCATGGAGTCGGCTGCGCCGCTCATGCTCGCGCATGGCCCGCTCGCCGCCGGTTTCACGGCGCCGGACAGGGGCTTCGCGGTCGTCACCGAGACCGAGCTCTACCCCTCGCAGGTGCGCCAGACGCGCCGCCGGGACGCGCGCGGACGCACGAGCGCCGAGGGGATGCTGCGCGACCTCGCCGAGGTAAAGGAAGGCGACCCCGTCGTGCACGGCCAGCACGGCATCGGGCGCTACCAGGGACTGGTGACCATGGACCTCGGCGAGGGCGCGACGGAATTCCTGCAGCTCGTGTACGAGGGTGGCGACAAGCTCTACGTGCCCGTCTCGCAGTTGCACCTGATCAGTCGCTATACCGGCGCCGCTCCCGAGGACGCGCCGGTGCACCGCCTCGGCAGCGGGCAGTGGGAAAAGGCGCGCCGCAAGGCCGCCCAGCAGGTGCGCGACACCGCCGCGGAACTCCTCGACCTCTATGCCCGGCGCGCCGCCCGGCAGGGCTACGCCTTTCCCCTCCAGGCGCAGGACTACGAGGCCTTCTCCGGGGCCTTCGAGTTCGAGGAGACGCCCGACCAGGCCGGGGCGATCCAGTCCGTCGTTTCCGACATGACCGGGGGCAAGCCCATGGACCGGCTCGTGTGCGGCGACGTGGGGTTCGGCAAGACGGAGGTCGCGATGCGCGCGGCCTTCGTCGCCGTGGCCGCGGGAAAGCAGGTGGCGATCCTGGTGCCGACGACGCTGCTCGCCGAGCAGCATTTCGCCAATTTCAGCGACCGCTTCGCGCCATGGCCGGTGAAGCTCGCGGAGCTCTCGCGCTTCCGCAGCCCGAAGGAGACGGCCTCGGCGATCGCGGGACTGGCCGACGGCTCGGTCGACATCGCCATCGGAACGCACAAGCTCATCCAGAAGGACGTCGTGTTCAGGAACCTCGGCCTCGTCATCATCGACGAGGAGCATCGCTTCGGGGTGCGCCAGAAAGAGCAGCTGAAACGACTGCGCGCCGAGGTCGACGTCCTCACGCTCACCGCCACGCCGATTCCGCGCACTCTGGCCATGTCCCTGGAAGGCCTGCGCGACTTCTCGGTCATCGCGACCGCGCCGCAGCGTCGCCTGGCCATCAAGACCTTCGTCGCCCGTTACTCGGCCGGCATCGTGCGCGAGGCGGTGCTGCGGGAACTGAAGCGCGGCGGGCAGGCCTACTACCTGTGGAACGAGGTCGAGACGATCGAGAACCGCCGCGAGATGCTCGAGAAACTTCTGCCGGAGGCGCGCATCGCGGTGGCGCACGGCCAGATGCGCGAGCGCGACCTCGAGCGCGTCATGCGCGACTTCTACCACCAGCGCGCGAACGTCCTGCTCTGCTCGACGATCATCGAGACCGGCATCGACGTGCCGACGGCCAACACGATCCTCATCGACCGCGCCGACCGCTTCGGGCTCGCCCAGCTGCACCAGCTGCGCGGCCGCGTGGGCCGCTCGCACCACCAGGCCTACGCCTACCTCCTCACGCCGCCCGAGGAGGGTCTCGGCGCCAACGCGAGGAAGCGGTTGGAGGCCATCCAGGCGATGGAGGAACTCGGCGCCGGCTTCTACCTCGCGATGCACGACCTGGAGATCCGCGGCGCCGGCGAGGTGCTGGGCGAGTCGCAGTCCGGCGGCATCCACGACGTGGGCTTCGCGCTCTACACCGAGATGCTCGAGCACGCGGTGAAATCGCTCAGGGCGGGCAGGGAGCCCGACCTCTCGCGGCCGGTGGCCGTGGCCACCGAGGTGAACCTGCACGCGCCGGCGCTCCTGCCCGAGATCTACTGCGGCGACGTGCACGAGCGCCTCGTGATCTACAAGCGGCTGGCCAACTGCGCCTCCGAGGACGACCTGCAGCGGCTCACCGAGGAGCTCGTCGACCGCTTCGGCGAGATCCCGGAACCCGCGCGCGTGCTGCTCGAGTGCCACCGCCTGCGCATCCAGGGCGCCCCGCTCGGCGTGGCGCGCATCGACGCGAGCCCCACGGCCATCGTCGTGCAGTTCGTGCCCGACCCGCCGGTGGACGGTCGGCGCATCATCGCGCTCGTGCAGTCGGGCGGGCGCTTTTCGCTGCCCGGGCCGGACCGCGTGCGCATCGAGGCCGCGATCGCAGACCTCCGGGCGCGGGCCGCGGAGGTGCGGCAGTTCATGAAGAGATTGGCACCGCCTTGA
PROTEIN sequence
Length: 1134
VARPAVARSGSSDALWIALLARSAKPVFVVTESAQDAERLRDEIAWFDPALAVHRLPDWETLPYDQFSPHPDLVSERLAALHRFSQGTCDVGLIPVSTALQRLAPRGYLAARTFFLRQNERLDLEALKSQLALAGYAAVQQVMAPGEFCIRGGLVDLFPTGSAVPYRLDLLDEEIESVHTFDVDTQRSIYPVAQVRLLPAREFPMDDEGRSRFRANFRERFEGDPTKRRAYKDVSNGVAPAGVECYLPLFFDETATLFDYLPPDATCVLHEDVPAGAQAFWDGLKGRWELLRGDRDRPLLPPDQLYLPTEEFFLALQGRPRLDVRRGCVGPAPANAPVLVAAELPGVGVDRRSAEPLRAFERFVSSFDGRVLVVADGPGRRETLAQFFAEHGLHPALCDDWTRFMESAAPLMLAHGPLAAGFTAPDRGFAVVTETELYPSQVRQTRRRDARGRTSAEGMLRDLAEVKEGDPVVHGQHGIGRYQGLVTMDLGEGATEFLQLVYEGGDKLYVPVSQLHLISRYTGAAPEDAPVHRLGSGQWEKARRKAAQQVRDTAAELLDLYARRAARQGYAFPLQAQDYEAFSGAFEFEETPDQAGAIQSVVSDMTGGKPMDRLVCGDVGFGKTEVAMRAAFVAVAAGKQVAILVPTTLLAEQHFANFSDRFAPWPVKLAELSRFRSPKETASAIAGLADGSVDIAIGTHKLIQKDVVFRNLGLVIIDEEHRFGVRQKEQLKRLRAEVDVLTLTATPIPRTLAMSLEGLRDFSVIATAPQRRLAIKTFVARYSAGIVREAVLRELKRGGQAYYLWNEVETIENRREMLEKLLPEARIAVAHGQMRERDLERVMRDFYHQRANVLLCSTIIETGIDVPTANTILIDRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPPEEGLGANARKRLEAIQAMEELGAGFYLAMHDLEIRGAGEVLGESQSGGIHDVGFALYTEMLEHAVKSLRAGREPDLSRPVAVATEVNLHAPALLPEIYCGDVHERLVIYKRLANCASEDDLQRLTEELVDRFGEIPEPARVLLECHRLRIQGAPLGVARIDASPTAIVVQFVPDPPVDGRRIIALVQSGGRFSLPGPDRVRIEAAIADLRARAAEVRQFMKRLAPP*