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cn_combo_scaffold_426_51

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 50895..51734

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368DF47 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 279.0
  • Bit_score: 551
  • Evalue 5.40e-154
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 279.0
  • Bit_score: 511
  • Evalue 1.70e-142
  • rbh
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJK86415.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 282.0
  • Bit_score: 511
  • Evalue 6.70e-142

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAAGGCGACTCTTTCCGCAGCGGTAGCCGCGATGGCGCTTCTGGTCGCAATGCCTGCCGGCGCGCAGGAAAAACAAAGCAAGCTCGATGAGGTTCTGGCGCGTGGCCACCTGGTCATGGGCACTGGCAGCACGAATGCGCCGTGGCACTTCAAGAGCGCCGACGACAAGCTGCAGGGCTTCGACGTCGACATGGGCCGCATCGTCGCCAAGGCGCTGTTCGGCGACCCGGACAAGATCGAATACGTCAACCAGTCGTCGGACGCGCGCATTCCGAACATCACCACCGACAAGGTCGACCTGACCTGCCAGTTCATGACGGTAACAGGCGAGCGCGCCCAGCAGATCGCCTTCACCATTCCCTACTACCGCGAGGGTGTCGGCCTGATGCTCAAGGGCGACGGCAAGTACGCCGACTATGCCGCGCTCAAGGGCGCCGGCTCGGGCGTGACCATCTCGGTGCTGCAGAACGTCTATGCCGAGGCCATGGTGCATGCCGCACTGCCTGAAGCAAAGGTCGACCAGTACGAATCCGTCGACCTGATCTACCAGGCGCTGGAATCGGGCCGTGCGGATGCCGTTGCCACCGACCAGTCGTCGCTCGCCTGGTACATGAAGCAGAACCCGGACCGCTACAAGGACGCCGGCTACGGCTGGAACCCGCAGACCTATGCTTGCGGCGTCAAGCGCGGCGACCAGGATTGGCTGAACTTCGTCAACACCGCCCTGCACGAGGCGATGACCGGCGTCGAGTTCGACTTCTACGCCAACTCCTACAAGACCTGGTTCGGCAAGGAACTGGCTCCGCCGCAGATCGGCTTCCCGGTCGAGTACAAGTAA
PROTEIN sequence
Length: 280
MKATLSAAVAAMALLVAMPAGAQEKQSKLDEVLARGHLVMGTGSTNAPWHFKSADDKLQGFDVDMGRIVAKALFGDPDKIEYVNQSSDARIPNITTDKVDLTCQFMTVTGERAQQIAFTIPYYREGVGLMLKGDGKYADYAALKGAGSGVTISVLQNVYAEAMVHAALPEAKVDQYESVDLIYQALESGRADAVATDQSSLAWYMKQNPDRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFYANSYKTWFGKELAPPQIGFPVEYK*