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cn_combo_scaffold_513_27

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 25821..26060

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379C2C2 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 79.0
  • Bit_score: 156
  • Evalue 1.10e-35
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 79.0
  • Bit_score: 157
  • Evalue 6.90e-36
iojap-like ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 79.0
  • Bit_score: 153
  • Evalue 2.00e-35

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGTCGTGGCCTCGGGCCGATCGCACCGTCATGTTGCGGCTGTTGTCGATCATCTGCTCAAGGCGCTCAAGGATGCCGGCTTCGGCAATGCGCGCGTCGAAGGGCTGTCGGGCGCCGACTGGGTGCTCGTCGATACCGGCGATATCATCGTCCACGTCTTCCGTCCTGAAATCCGCGAGTTCTACAACATCGAAAAGATGTGGCAGGCGCCGGATCTCGAGGAAGAGACGGTTCACTGA
PROTEIN sequence
Length: 80
MVVASGRSHRHVAAVVDHLLKALKDAGFGNARVEGLSGADWVLVDTGDIIVHVFRPEIREFYNIEKMWQAPDLEEETVH*