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cn_combo_scaffold_572_23

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(19582..20817)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D06E0 similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 412.0
  • Bit_score: 693
  • Evalue 1.70e-196
Xyl repressor {ECO:0000313|EMBL:CCV04962.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 413.0
  • Bit_score: 614
  • Evalue 8.20e-173
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 406.0
  • Bit_score: 610
  • Evalue 4.10e-172

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Taxonomy

Mesorhizobium metallidurans → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGTCGGTCGGCATTCGTCACGACGATCTCAGGAAGCGCAATCGCGCCATGGTCATTTCCGCGGTGCGCCGTGCCGGCCAGCCGTCGCGCACCGAAATCGCGGCAACCACCGGCCTCAGCCACTCGACGATCTCAACGATCTCCTCCGATTTGATCGGCGAAGGCATCCTTGCCGAATCCAAGGGCGGCGAACCGGCGCTCATGAAGCGCGGCAGGCCCCAGGTTGGGCTCGCGCTCGACCCCGACGCCGCCGCGGTCGTCGCCGTGGTGCTTTCACTCAACAGCCTGTCGGCCGCGCTCATCGACTATGCCGGCAACACCATCGCAGAGGAGAGCCGCAGGCTCGTTACCCAACGCATGGAAGCCGATACCCTCGTGGACGAATGCATCGGCATCGTCCGCCGCCTGATCGAGGCCGGCAACAAGGGCGCGGTACTGCGCATCGCCGTCGCCATCCAGGGGGTCACCGATTCCGGCTCGCGCACGCTTCTGTGGTCGCCGATCACCCCGCATGACGACATTCCATTCGCCGACAAGCTCGAGCAGGAGTTCGGCGTGCCGGTGACCGTCGAGAACGACTGCAACATGATCGCCGAGGCGCTGCGCTGGCGGGATCCTTCCCGCTACCGCGACGACTTCATTGCCATCCTGCTCTCGCACGGCATCGGCATGGGACTGGTGACCAAGGGCGAACTCTTCACCGGCACGCAATCGTCGGGCGGCGAATTCGGCCACATGATCCATCGCCCCGACGGCGCGCTGTGCCGCTGCGGCCGGCGCGGCTGCATCGAGGCCTATGCCGGCAACTACGCCATCTGGCGCAACGCCAGGCAGGGCGACGAGAACGCGGAGCCCCTCGCGGACCTCTCTGACGGTGACATCCGCGCACTCGCGGACGCCGCCCGCGACCACGACGGTCCTGAGCGCGAGGCCTTCCGCAAGGCGGGCGAAGCCATCGGCTTCGGCCTCGGCTCCATGTTCGCGCTGTTCGACCCAGCGCCGCTCGCCTTCGTCGGCGTCGGCGCCACCGCCTTCGACCTGATGGAACCGCATGTCCGCGCCGCGATCGCCAAGACCGCGGGCGGACTGCATTCCAAGGCGATCTCCTTCGACACCGAGCCCAACGAGGTGCCGCTCATCCGCGAGGGCTGCATGATGCGCGCCCTGCTCTATGTCGACGACGAGGTCTTCGCTCCGGGCACGCCGGCCCGCCGTGCGCAGGTCGGCGTCGCCTGA
PROTEIN sequence
Length: 412
MSVGIRHDDLRKRNRAMVISAVRRAGQPSRTEIAATTGLSHSTISTISSDLIGEGILAESKGGEPALMKRGRPQVGLALDPDAAAVVAVVLSLNSLSAALIDYAGNTIAEESRRLVTQRMEADTLVDECIGIVRRLIEAGNKGAVLRIAVAIQGVTDSGSRTLLWSPITPHDDIPFADKLEQEFGVPVTVENDCNMIAEALRWRDPSRYRDDFIAILLSHGIGMGLVTKGELFTGTQSSGGEFGHMIHRPDGALCRCGRRGCIEAYAGNYAIWRNARQGDENAEPLADLSDGDIRALADAARDHDGPEREAFRKAGEAIGFGLGSMFALFDPAPLAFVGVGATAFDLMEPHVRAAIAKTAGGLHSKAISFDTEPNEVPLIREGCMMRALLYVDDEVFAPGTPARRAQVGVA*