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cn_combo_scaffold_572_24

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 20947..22113

Top 3 Functional Annotations

Value Algorithm Source
D-xylose ABC transporter, substrate-binding protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHC7_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 346.0
  • Bit_score: 599
  • Evalue 2.40e-168
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZQ14474.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 346.0
  • Bit_score: 603
  • Evalue 2.30e-169
D-xylose ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 346.0
  • Bit_score: 599
  • Evalue 6.80e-169

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCCGCGCGAAAGGCGGTTGACAGCGGACAGCCATTACTCCAGTCTTTTTTCGAGGCTCGAAAAAAAGAGCTTCTCCAAGGGCTATCGCCAGATAAGCGCGCCCGTGGGGCGCAGGGAGGAAATGATGAAGAGATTTACGACCGCCATATTGGCGGGTGTCGCCATGACTCTTGCTCTCTCGGCGGTCGCCGAAGCTAAGGGCAAGGTCATCGGCGTTTCTTGGTCGAACTTCCAGGAAGAGCGCTGGAAAACTGACGAAGCAGCGATGAAGGCCGCGATCGAGGCCGCTGGCGACAAGTATATTTCGGCTGACGCACAGTCCTCCGCCGCCAAGCAGCTGACCGACGTCGAAAGCCTGATCAGCCAGGGCGCCAATGCGCTTATCATCCTGTCGCAGGACGCTTCCGCCATCGGCCCCGCCGTCGAAAAGGCGCTCGCCGAGGGTATCCCGGTCGTGGGCTATGACCGCCTGATCGAGAACAAGGACGTCTTCTACCTGACCTTCGACAACAAGGAAGTGGGCCGCATGCAGGCCGCCGAGGTGTTCAAGGTCAAGCCCGAGGGTAACTACGTCTTCATCAAGGGTTCGTCCGCCGACCCGAACGCCGACTTCCTGTTCTCCGGACAGATGGAAGTGCTGAAGGAGGCCGTTGACGCCGGCAAGATCAAGAGCGTCGGCGAGGCCTACACCGACGGCTGGCTGCCCGCCAACGCCCAGAAGAACATGGAGCAGTTCCTGACCACCAACGACAACAAGGTCGATGCGGTGGTCGCTTCCAACGACGGCACGGCCGGCGGCGCGATTGCCGCGCTCCAGGCGCAGGGTCTCGCCGGTTCGGTGCCGGTTTCCGGCCAGGACGGTGACCATGCCGCCCTCAACCGCGTCGCGCTCGGCACCCAGACCGTTTCGGTGTGGAAGGACGCGCGCGAACTCGGCAAGAACGCGGCGGAGATCGCCTCGCAGCTCGCCGACGGCAAGAAGATGGAAGAGATCCCGAACGTCCAGAAGTTCACGACCCCGGGCGGCAACGAGACGAACTCGGTGTTCCTGAAGCCGGTTCCGATCACCAAGGACAACCTCAACGTGGTCATCGACGCGGGCTGGGTTTCGAAGGACGTCGTCTGCCAGGGCGTCGCCGCCGGCTCCGTGGCCGCCTGCAACTGA
PROTEIN sequence
Length: 389
MPRERRLTADSHYSSLFSRLEKKSFSKGYRQISAPVGRREEMMKRFTTAILAGVAMTLALSAVAEAKGKVIGVSWSNFQEERWKTDEAAMKAAIEAAGDKYISADAQSSAAKQLTDVESLISQGANALIILSQDASAIGPAVEKALAEGIPVVGYDRLIENKDVFYLTFDNKEVGRMQAAEVFKVKPEGNYVFIKGSSADPNADFLFSGQMEVLKEAVDAGKIKSVGEAYTDGWLPANAQKNMEQFLTTNDNKVDAVVASNDGTAGGAIAALQAQGLAGSVPVSGQDGDHAALNRVALGTQTVSVWKDARELGKNAAEIASQLADGKKMEEIPNVQKFTTPGGNETNSVFLKPVPITKDNLNVVIDAGWVSKDVVCQGVAAGSVAACN*