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cn_combo_scaffold_922_13

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9089..9685)

Top 3 Functional Annotations

Value Algorithm Source
lysine transporter LysE n=1 Tax=Hoeflea sp. 108 RepID=UPI0003607228 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 198.0
  • Bit_score: 363
  • Evalue 1.50e-97
Lysine transporter LysE {ECO:0000313|EMBL:ESX69435.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 331
  • Evalue 8.70e-88
putative threonine efflux protein similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 198.0
  • Bit_score: 319
  • Evalue 5.30e-85

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGTCCTACGACGCGTTCCTTGCATTGCTGGTCTATGCGTTCGTGACCTCGATCACGCCCGGTCCCAACAACTTCATGTTGCTGGCGTCCGGCGTGAATTTCGGCTTCGTACGGACCATTCCGCACATGCTGGGCATCGGCTTCGGCTTTCTGTCGCTGCTGCTCGGCGTGGGGTTCGGCTTGGGCGCACTGCTGTCGACCTTTCCGATCCTGCACGGCGGCCTGAAGATCGCGGGCGGCGCCTATCTGCTCTACCTTGCCTGGCGCATCGGGATGTCGCGCTCGCTCGGCAACAGCAGCGACAGCAAGGCCCGGCCGATGACCTTCCTCGAGGCGGCCGCATTCCAGTGGGTCAATCCCAAGGCGTGGGTGATGGCTGTGACGGCTATGGCGGTCTATACGAGCCCGGAGTCGCCCTTCTTGTCCGTGCTGCTGATCTCGGGCGCCTTCGCCCTGGTCAACCTGCCGAGCGTCTCCAGTTGGGCCGGCTTCGGCATGGCGCTCCGTGGTTTCCTCGCCGAGCCGGCGCGGCTGAAATGGTTCAACATCGCCATGGGCGTCCTGCTCGCGGCGACGCTGTGGCCGATGCTGAAATAG
PROTEIN sequence
Length: 199
VSYDAFLALLVYAFVTSITPGPNNFMLLASGVNFGFVRTIPHMLGIGFGFLSLLLGVGFGLGALLSTFPILHGGLKIAGGAYLLYLAWRIGMSRSLGNSSDSKARPMTFLEAAAFQWVNPKAWVMAVTAMAVYTSPESPFLSVLLISGAFALVNLPSVSSWAGFGMALRGFLAEPARLKWFNIAMGVLLAATLWPMLK*