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cn_combo_scaffold_1048_15

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16531..17127

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037552F2 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 191.0
  • Bit_score: 337
  • Evalue 6.70e-90
XRE family transcriptional regulator {ECO:0000313|EMBL:ESW86198.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 180.0
  • Bit_score: 299
  • Evalue 4.80e-78
cupin similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 180.0
  • Bit_score: 296
  • Evalue 4.80e-78

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
TTGAAAGCGGCAGCATCCCCCTCAGCGCCGATCCAAGGCGAGGTCAACGGCGACCTGCTGGCCGCCGACTTGCGCGCCCTGCGCAAGTCGCGCGGCCTCACGCTTACCGAAGTCGCGCTGAAACTCGGCCGTTCGGTTGGCTGGGTCAGCCAGGTTGAACGCGGCCTGTCCACACCATCGATCGGCGACCTCCGGGCATTTGCCGAACTGTTCGGCGTGCCGATCAGCCTGTTCTTCGCGCATGAAGCCACGAACGAGGCGGAACGCGGCGCCATCGTACGTTCGGGCCGGCGACGGAAGCTCGGAACGAGCGATTCGGGACTGGTCGAAGAACTCCTGTCACCCGACCTCGGCGGCAGTTTCGAGATGCTGCGCTCGATCTTTGCACCCGGCGCCGAACTGGCCGAACCGGCGACGCGCCCCACCGAGGAGGCCGGTTACGTCGTCTCGGGCGCTTTCGACATCGAGATCGACGGCACCTGGCACAGCCTGGGCGTAGGCGACAGCTTCCGCTTCGACCACAAGCCGTTCCGGTGGCGAAACCCCGGCTTCGTGCCGGCGGTGGTCATCTGGGTCGTGGCGCCGCCGGTCTATTGA
PROTEIN sequence
Length: 199
LKAAASPSAPIQGEVNGDLLAADLRALRKSRGLTLTEVALKLGRSVGWVSQVERGLSTPSIGDLRAFAELFGVPISLFFAHEATNEAERGAIVRSGRRRKLGTSDSGLVEELLSPDLGGSFEMLRSIFAPGAELAEPATRPTEEAGYVVSGAFDIEIDGTWHSLGVGDSFRFDHKPFRWRNPGFVPAVVIWVVAPPVY*