ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

cn_combo_scaffold_1202_8

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(6534..7013)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A7FA2 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 153.0
  • Bit_score: 211
  • Evalue 7.60e-52
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:CDX62477.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 148.0
  • Bit_score: 167
  • Evalue 1.80e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 148.0
  • Bit_score: 160
  • Evalue 5.60e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGACTGCACAGACCAAGATCGAAAATGTCGGCCAGGTGCTCTGGTTTGGCGACAATCTAATGACGATCCGTGTGCCGGCGAGCGCTGGAAACGACCAGATCAGCATCATCGAATGCCGCATGCCGCAGGGCGAGTCGACGCCCTTGCACGTCAATCTCAGCGAGGACGAGATCATCCACATACTCGAGGGTACGATGCGCTTTCGCGTCGACGGCAAGGTGTTCCTCGCCCATGCCGGTCAGACCGTGATGGCCCCCAAGGGCATCCCACACACCTTCAAGGTCGAATCTCCCGATGGCGCCACCTGCCTGATCGTCACCCAGGGCGGGGATTTCGAGCAGATGGTTCGGCAGATGAGTGTGCCGGCGCAGAGCGCCGGTCTTCCTCCCAGGTCCGAAAGGACGCCGGAAACCGCCAGGCGGTTTTTCGACACCTGCGCCCGCAACAACATTCAGATCATCGGCGCCCCCCTCAACTGA
PROTEIN sequence
Length: 160
VTAQTKIENVGQVLWFGDNLMTIRVPASAGNDQISIIECRMPQGESTPLHVNLSEDEIIHILEGTMRFRVDGKVFLAHAGQTVMAPKGIPHTFKVESPDGATCLIVTQGGDFEQMVRQMSVPAQSAGLPPRSERTPETARRFFDTCARNNIQIIGAPLN*