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cn_combo_scaffold_1204_4

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2407..2808)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F62E6 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 133.0
  • Bit_score: 251
  • Evalue 4.20e-64
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 133.0
  • Bit_score: 250
  • Evalue 1.30e-63
ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 133.0
  • Bit_score: 247
  • Evalue 2.90e-63

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGGCACGCGTCAAAAGGGGCGTAACCGCCCACGCCAAGCACAAGAAGGTTCTCGCCCAGGCCAAGGGTTTCTACGGCCGCCGCAAGAACACCATCCGCATTGCCAAGCAGGCGGTGGAGAAGTCGAAGCAGTACGCTTACCGCGACCGCAAGAACCGCAAGCGCAACTTCCGCGCCCTGTGGGTCCAGCGCATCAACGCCGCGGTTCGCGAGCACGGCCTGACCTACGGCCGCTTCATCGACGGTCTGAACAAGGCCAACATCGAGATCGATCGCAAGATCCTCTCCGACATGGCAATCCATGAGCCGCAGGCATTCGCCGCGCTCGTGGCCAAGGCCAAGGTTGCTCTTGAGTACCTCAAGAACACCACCCCGAATGCTTTTGAAAGCGCTGTTGCTTAA
PROTEIN sequence
Length: 134
MARVKRGVTAHAKHKKVLAQAKGFYGRRKNTIRIAKQAVEKSKQYAYRDRKNRKRNFRALWVQRINAAVREHGLTYGRFIDGLNKANIEIDRKILSDMAIHEPQAFAALVAKAKVALEYLKNTTPNAFESAVA*