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cn_combo_scaffold_1225_11

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(11957..12415)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 150.0
  • Bit_score: 260
  • Evalue 1.00e-66
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EHK58364.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 150.0
  • Bit_score: 260
  • Evalue 1.50e-66
protein TolR similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 152.0
  • Bit_score: 253
  • Evalue 4.70e-65

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGGAATGTCAGTCAGCGCGGGCGGTTCAGGCCGAGGCTCACGCGGCCACCGGCGGCGCGGCCGCCACCACGGCCTGATGTCGGAAATCAACGTCACGCCCTTCGTGGACGTGATGCTGGTGCTGCTCATCATCTTCATGGTCGCAGCCCCGCTGCTCACCGTCGGCGTGCCGATCGATCTGCCCGAGACGCAGGCCAAGGCGATGAATTCGGAAACCCAGCCGATCACCGTCTCGGTCAACGACCAGGGCCAGATCTATCTCCAGGAAACCGAGATCCCTATCGACGAGGTCGTCGCCAAGCTCGAGGCCATCTCCAAGACCGGCTACGAGGAGCGCATCTATGTGCGCGGCGACAAGACCGCCGACTACGGCACGGTGATGAAGGTCATGGCGCGCATCTCCGCCGCCGGCTTCCGCAATCTCGGCCTCGTCACCCTTCAGGAACAGGACCAGTAG
PROTEIN sequence
Length: 153
MGMSVSAGGSGRGSRGHRRRGRHHGLMSEINVTPFVDVMLVLLIIFMVAAPLLTVGVPIDLPETQAKAMNSETQPITVSVNDQGQIYLQETEIPIDEVVAKLEAISKTGYEERIYVRGDKTADYGTVMKVMARISAAGFRNLGLVTLQEQDQ*