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cn_combo_scaffold_1225_22

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(18373..18912)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EBB8E similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 179.0
  • Bit_score: 331
  • Evalue 7.40e-88
AraC family transcriptional regulator {ECO:0000313|EMBL:ESY94057.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 178.0
  • Bit_score: 290
  • Evalue 2.00e-75
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 178.0
  • Bit_score: 289
  • Evalue 5.30e-76

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGATGAACGAGCCTTCGAAGGAAAGCGCGAACACGATCAAGCTCGCCGAGAGGCGGGTGTTTTCGCCATCCTTCAAGCCCCTCTACAATGAGGGCATGGGGCTGGTCGAACAGGCAGCCGAGTATCTTGACGGCGCCGGCCGGGTCGAGGCCAAGAAGCTGTCTCGCCTTGCGGCAACGCTCTACGCGGCCGAATCGATGCGTCTCACCACCAGGCTGATGCAGATCGCCTCGTGGCTGCTGCTGCAGCGTGCGGCCAATTCCGGCGAAATGACGCGCGACCAGGTCGCAGCCGAAAAGGCCAAGGTCAGGCTCGACACCGCCTCGGCGCATGACGAGGCCGCCGGCTGGAACGAATTGCCCACCGCATTCGTCGATCTCGTGCGCCGCTCGCTCAGGCTACAGGCACTCGTTCGCCGCATGGACGAGGAGATCTACGGCAACGGCGCGACCGTGTTGCCTGTCCAGTCGATGCGCCGCAGCAGCAATCCGGTTTCCGACCAGATCAACCTGCTCAACACCGCCTTCGCCCGGAACTAG
PROTEIN sequence
Length: 180
MMNEPSKESANTIKLAERRVFSPSFKPLYNEGMGLVEQAAEYLDGAGRVEAKKLSRLAATLYAAESMRLTTRLMQIASWLLLQRAANSGEMTRDQVAAEKAKVRLDTASAHDEAAGWNELPTAFVDLVRRSLRLQALVRRMDEEIYGNGATVLPVQSMRRSSNPVSDQINLLNTAFARN*