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cn_combo_scaffold_1246_34

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(38741..39415)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003798EEA similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 224.0
  • Bit_score: 396
  • Evalue 1.40e-107
DNA-binding response regulator in two-component regulatory system with QseC {ECO:0000313|EMBL:CDX37094.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 224.0
  • Bit_score: 367
  • Evalue 1.20e-98
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 224.0
  • Bit_score: 359
  • Evalue 8.90e-97

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGCATCCTCCTGGTCGAAGACGAACCGGAACTGGCTTCCGCGCTGCGCACGGCGCTCAGGCGCCACGACATGGTCGTGGATCACGCCTCGTCGTTGCTCGAGGCCGAGGACTACGCCGAAGCCGAGGGCTACGACGCCATACTGCTCGACCGGCAGTTGCCCGACGGCGACGGCCTGACGCTGGTGCCCAAGCTGCGCGGCCGCGGCAACGCCACGCCGGTGCTGGTGCTGACGGCGCGCAGCGACACATCCGACAAGGTCGACGGGCTCGACATGGGCGCCGACGACTACCTGGCCAAGCCCTTCGCCTTCGAGGAACTGCTGGCACGGTTGAGAGCCCTCCTGCGCCGGCCGGCGAATGTGCAGACGCAGGTCATCCGCGCGGGAGACCTCGCCTTCGATTTCGGCCATCGGGAGGTTTCCGTACGCGGCGAGCCGATGACCCTGCCGCGCCGCGAACTGCTGGTGCTCGAAGCGCTTTTGAAGCGGACGGGCCGCATGGTGCAGCGGACATCGCTGATGGAGGCCGTGTTCGGGCTGGACGACGAAATCCAGTCCAACGCGCTCGACACGCATGTGTCGCGGCTACGCCGCAAGCTCGCCGAAGCGGCGTGCGGGGTCGAGATCAACGGCGTGCGCGGCGTCGGCTACCTGCTGCGCGAGACTTCATGA
PROTEIN sequence
Length: 225
MRILLVEDEPELASALRTALRRHDMVVDHASSLLEAEDYAEAEGYDAILLDRQLPDGDGLTLVPKLRGRGNATPVLVLTARSDTSDKVDGLDMGADDYLAKPFAFEELLARLRALLRRPANVQTQVIRAGDLAFDFGHREVSVRGEPMTLPRRELLVLEALLKRTGRMVQRTSLMEAVFGLDDEIQSNALDTHVSRLRRKLAEAACGVEINGVRGVGYLLRETS*