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cn_combo_scaffold_1246_46

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(50173..51078)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F5595 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 299.0
  • Bit_score: 577
  • Evalue 5.80e-162
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX14517.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 296.0
  • Bit_score: 529
  • Evalue 3.30e-147
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 296.0
  • Bit_score: 527
  • Evalue 3.30e-147

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGATCGACAAGCTTGAATTCTTCATTGCCCTTGCCAGGGAAGAGCATTTTGGACGCGCCGCCGAGGAATGCCGCGTCACCCAGCCGACGCTTTCAGCCGGCATCAAGCAGCTCGAGGACATCCTCGGGGTGATGCTGGTGCAACGCGGATCGCGCTTCCAGGGCCTGACGCCCGAGGGTCGGCAAGTGCTGGAATGGGCGCGGCGGATCGTCGGCGACACCCGCGCCATGCGCGAGGAGATGCGCGCCGCCCGCCACGGCCTGTCGGGGCGCATCCGCATCGCCGCCGTGCCGACCGCGCTGGCCATGATACCGCAACTGACCACGCCGTTCCGCGACAAGCACCCTGGCGTCACTTTCTCGATCCTGTCGCGCACCTCGATCGAGGTGCTGTCGCTGCTCGGCAACTACGAGATCGACGCGGGAATCACCTATCTCGACAACGAACCGCTGGGACGCGTGACGAGCGTGCCGCTCTATGCCGAGCGCTACCAGTTGATCACGGCCGCTGGCAACGAATACTCCGATCGCGACAAGGTCACCTGGGAGGAAGTGAGCACATTGCCGCTCTGCCTGCTCACGCCCGACATGCAGAACCGCCGCATCATCGACCAGCATCTCGCCGAGGCCGGCGTGCAGGTGCGACCCACGCTCGAATCGAATTCGATGATCGTGCTGTTCTCCCACATCCGGACCGGCAAATGGTCGTCGATCATGCCGCTCAACCTTGCGGAAACCTTCGGTTTTGCCGAGCCGATCCGGGCTATTCCGATCATCGAGCCGGACGCGAGCCACACGGTTGGACTGGTGGTGGCGAAGCGCGATCCGAACACCACGCTCGTCCAGGCGCTGCTTGACGAAGCCATGGCGCTGGCAGGCGATTTTCGCCGCAAATCGGAGTTATAA
PROTEIN sequence
Length: 302
MIDKLEFFIALAREEHFGRAAEECRVTQPTLSAGIKQLEDILGVMLVQRGSRFQGLTPEGRQVLEWARRIVGDTRAMREEMRAARHGLSGRIRIAAVPTALAMIPQLTTPFRDKHPGVTFSILSRTSIEVLSLLGNYEIDAGITYLDNEPLGRVTSVPLYAERYQLITAAGNEYSDRDKVTWEEVSTLPLCLLTPDMQNRRIIDQHLAEAGVQVRPTLESNSMIVLFSHIRTGKWSSIMPLNLAETFGFAEPIRAIPIIEPDASHTVGLVVAKRDPNTTLVQALLDEAMALAGDFRRKSEL*