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cn_combo_scaffold_1293_40

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(38494..39258)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVZ1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 254.0
  • Bit_score: 395
  • Evalue 4.50e-107
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 265.0
  • Bit_score: 399
  • Evalue 2.60e-108
outer membrane protein assembly complex, YaeT protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 254.0
  • Bit_score: 375
  • Evalue 1.40e-101

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
TCGCAGGAAGAGTACTCGCTCACTGACGAGTGCGATCCCGACGGAGACGGTATTGCGAATCCCGGTTGCGACGTCTCGCAGGCCATCGAGGATGGCGTCGAGGACAGTCCTTGGATCAAGTCGTCGGTCAGCGGCACGCTGGTCTATAATACGATCGACGACATGAAGAGCCCGCACAACGGCATCTACGCCAACTTCACGACCGAAGTGGCCGGCCTGGGCGGTGACGCACAGTTCGTCAAGGTCACGGGACGTGGCAGCTACTATCAGACGCTGTCCGAGGAGTTGGACATCGTCGGCCTGGTTTCGGCGGGTGGCGGACACGTTGCCGGATTCGGCGGCGACAGCAGCCTGCGCGTGTTCGATCAGTTCAAGAACAACGATCGCATGATCCGCGGCTTCGAGTATAACGGCATCGGCCCGATCGACCCGGCTAGCGGGGACCATCTCGGTGGCACGACCTACTTCAATGCGTCGGTCGAGGCGCAGTTCCCGATCCCGATCGTTCCGGAGAGCTTTGGTCTGCGCGGTGCAGTATTTGCTGATGCGGCGACGCTGTATGGCAGCAAGGTGGACCGAAATGTTGGTACTCCTCAGGAGTTCGACATTGTCGGCACGAGCATGCAGTGGCGCGCTTCGGTCGGCTTTGGCCTGCTCTGGGCGTCGCCCTTCGGCCCGCTGCGCATCGACTACGCGGTGCCGGTCGCCAAGGAAGACACCGACGATACGCAGGAATTCAATTTCGGTATCTCGACCCGCTTCTAA
PROTEIN sequence
Length: 255
SQEEYSLTDECDPDGDGIANPGCDVSQAIEDGVEDSPWIKSSVSGTLVYNTIDDMKSPHNGIYANFTTEVAGLGGDAQFVKVTGRGSYYQTLSEELDIVGLVSAGGGHVAGFGGDSSLRVFDQFKNNDRMIRGFEYNGIGPIDPASGDHLGGTTYFNASVEAQFPIPIVPESFGLRGAVFADAATLYGSKVDRNVGTPQEFDIVGTSMQWRASVGFGLLWASPFGPLRIDYAVPVAKEDTDDTQEFNFGISTRF*