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cn_combo_scaffold_1463_27

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(29671..31047)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000378FD2C similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 458.0
  • Bit_score: 685
  • Evalue 3.90e-194
Transporter {ECO:0000313|EMBL:ESX74217.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00. similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 459.0
  • Bit_score: 669
  • Evalue 4.10e-189
type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 457.0
  • Bit_score: 645
  • Evalue 9.70e-183

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
GTGTCGTTTTTCCGCAAGAGCTTGTTTGCCGTGGCCTTGGTCTCCGCTACGGCGCTGTCGCCGTTGTCGGCCGAGGCCGAAACCATCCTCGGCGCCTTGACCAAGGCGTACCAGAACAACTCGACCCTGAATTCGGCCCGGGCAGGCGTGCGCGTCACCGACGAGGACGTCGCGATAGCCAAGTCCGGCTGGCGCCCGACCATCGCGGGCGTCGGCAACATCGACTACGAGTCGCGGCGCTTCCGCAACACAACCGCGAACATCACCACCGGCCAGTTCGGCGTCGAGATCAACCAGACGCTGTTCGACGGCTTCCAGACCAAAAACAACGTCGCAGCCGCCGAGGCGAGCGTGCGGGCCTCGAACGAGAGCTTGCGCAACACCGAGCAGAACACGCTGTTCAACGCTGCGGCCGCCTACATGGACGTCATCCGCGACCGGCGCGTGGCCCAGTTGACCGAGCAGAACCTTCAGTTCCTGACCGAGCAGGCGCGTGCGGCCCGTTCGCGCTTCGAGGTGGGCGAGGGCACGCGCACCGATGTGGCGCAGGCCGATGCCTCCCGGTCAGATGCCATCGCCCAGCTGAGCTCCGCCCGGGCGCAGGCGCTTTCGAGTGCCGCGGTCTATCGCGAGATCGTCGGTGACCAGCCCAACAACCTGCAGGCTGCATCGCCGCTCGCCAAGCTCCTGCCCAAGAGCCTCGACAGTGCGCTTGCCGAGGCCGCGGGCGATCATCCGGCGATCCTTGCCACCGAGTATCTGGTCGATGCCGCCGGCTTCAGGGTCAAGTCGGCCGAGGGCCAGTTGTTGCCGCGCGTTACGGCAGGTGCCGGGATATTCCAGAACTACGCCAACACGTCTCCTTCGCTCGATTCGGACGGCAATCGGAGCTCCGCCAATATCGGTGCAACGCTTACCGTGCCGATCTACCAGGGCGGGCGCGTATCGGCGCAGGTGCGGCAGTCCAAGGAATCGCTCGGTCAGGCGCGCATCGAGGTCGACGTCAGCCGTGATCGCGTGCAGGCGGCGGTGACCTCGGCGTGGTCGCAGTATACGGCCGCGGTCGAGAGCGTGTCGGCCAACCGCGAGTTGGTGGCGGCCCAGCAACTCGCGCTGAACGGCGTGATCGAAGAGCGCAACGTCGGCCAGCGCACGACGCTCGACGTGCTCAATGCCCAGGCCGACGTTATCACCGCCCAGATCAACCTGGCGACGTCCGAGCGCGACGCGGTGGTGGCGAGCTACGCCATCCTGTCGGCGATCGGAAATCTGTCGGTGGACCGGCTCGGGCTGCGGGTGGCCAAGTACGAGCCCAAGGAGCACTACAACGCAGTCAAGGACAAGTGGATCGGCCTCAGGACGCCCGACGGCCGCTGA
PROTEIN sequence
Length: 459
VSFFRKSLFAVALVSATALSPLSAEAETILGALTKAYQNNSTLNSARAGVRVTDEDVAIAKSGWRPTIAGVGNIDYESRRFRNTTANITTGQFGVEINQTLFDGFQTKNNVAAAEASVRASNESLRNTEQNTLFNAAAAYMDVIRDRRVAQLTEQNLQFLTEQARAARSRFEVGEGTRTDVAQADASRSDAIAQLSSARAQALSSAAVYREIVGDQPNNLQAASPLAKLLPKSLDSALAEAAGDHPAILATEYLVDAAGFRVKSAEGQLLPRVTAGAGIFQNYANTSPSLDSDGNRSSANIGATLTVPIYQGGRVSAQVRQSKESLGQARIEVDVSRDRVQAAVTSAWSQYTAAVESVSANRELVAAQQLALNGVIEERNVGQRTTLDVLNAQADVITAQINLATSERDAVVASYAILSAIGNLSVDRLGLRVAKYEPKEHYNAVKDKWIGLRTPDGR*