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cn_combo_scaffold_1471_22

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(16338..17096)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003616630 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 255.0
  • Bit_score: 320
  • Evalue 1.80e-84
LuxR family transcription regulator {ECO:0000313|EMBL:CDX54804.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 259.0
  • Bit_score: 272
  • Evalue 8.00e-70
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 224.0
  • Bit_score: 266
  • Evalue 8.80e-69

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
TTGAGCTACGCCCAATCCCGACAGGCCGCCCAGTCAACCGAAGCCGCACAGGACACTGCCTCCTCCGGACATCCCGCCTACGCATCCGGCCCGGCGGTCACGCTTGCCGATGTCGTGAGGCGCTGCCGCTGGATCGCTGCGGACCTGCAGGCCAGCGACTTCGCGCTCTGCCTCGCCGGACCTTCGTCCGAAAGCGGCCGGCTCGTTGCCTGCTTCGATTCAGACTATCCCGGCACCATGTCGGCCGCCCGCCTGCTGGGCGGCGGCATCGGCGAACACCTGATGCGCCATGTGCGCCAGTCGACCGCCCCCTGCTGGTGGACCGAAGACGCCGCCGAGGCGGCCTTTGCTTCACTCGCCTGGGCGAGCCGCATCGAACCCCTGGCACAGAGCGGCCGGGGCATTGCCTTCCCGGTCTACACCGCCCGGGGTCAGGCCGGCCTGTTCATCTTTGGCGGACCGGACCTTACGCCGAACGCGAAGGCGCTGCATGAGGTTCATACCCGCTGCTTTGCCCTCTTCGAGGCGGTGGCGCGCATCAATCCCGCCCGGGCGGGCAAGCTGCCGTCGATGTCGCGTCGCGAAGTCGAGTGCCTCAAGCTCACCTCGCGCGGATATACCAGCGAGGAGATCGCCAAGCTGCTCAAGCTGTCGGTCCACACCACCAACCAGTATCTCACCCAGACGACGCAGAAGCTGAATGCGGTCAACCGCATGCACGCGGTCGCCAAGGCGCTGCGCCTCGGGCTGATCGACTAG
PROTEIN sequence
Length: 253
LSYAQSRQAAQSTEAAQDTASSGHPAYASGPAVTLADVVRRCRWIAADLQASDFALCLAGPSSESGRLVACFDSDYPGTMSAARLLGGGIGEHLMRHVRQSTAPCWWTEDAAEAAFASLAWASRIEPLAQSGRGIAFPVYTARGQAGLFIFGGPDLTPNAKALHEVHTRCFALFEAVARINPARAGKLPSMSRREVECLKLTSRGYTSEEIAKLLKLSVHTTNQYLTQTTQKLNAVNRMHAVAKALRLGLID*