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cn_combo_scaffold_1471_26

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(20403..21113)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EC12B similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 224.0
  • Bit_score: 411
  • Evalue 7.40e-112
Transcriptional regulator {ECO:0000313|EMBL:CDX54800.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plu similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 228.0
  • Bit_score: 361
  • Evalue 1.20e-96
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 218.0
  • Bit_score: 357
  • Evalue 2.70e-96

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCTGGCAGCGAGCAGGGAGCGAGAAGTTCTGTCCGTGGATCGCAGTCTCACCAAGAAGATCAGCGCGGCACTCAGCCCGCGCAAGCAGCCGCGACAGGAACGGTCGAGCAAGGTTGTCGACAGGATTCTCGACGCCGCCCTGACCTTGACCAGGGAACAGGGCACCAAGACGCCGACGACGCTCGCCATCGCCCAGCGCGCCGGCCTGTCGGTCGGCTCGGTCTATCAATACTACCCCAACAAGGAAGCGATCCTTCTCGACCTCGCCCGGCGCTGGCTCGGCGCTTTCCCCGAGGTGATCGCCAAGCGCATCGCAGCGCCCCGCCCCACCAACCGCGACGAATTCCAGCAGGAGGTGGACAAGCTCTTCGTCGACACCTCCAAGCTCTATCTCGACAACGCCAACCTGATGCCGGTCATCGAGGCGATCACCGGCAATCCCGACCTCAGGCCGATCCAGAACGAGTATGACGAGCAGATCATCGCGCTCTATGCTGCCTGGCTGCAGCATGTGAACCCGGCGCTCGAGGACGGCACTGCCAGCCGGCTCGGGGTGGTGATGATGGAGGTCGGCCACGTTTGCCGCCTTGTCGGCCTCAAGCGCGACCGACGTGCATTCGATCTCATTCAGGACGACGTCAAGACCATGTGGCTCGCCCTCGTCGCCCCCTATCTCGACCTCAAGCAGAACCAGGAAGGATTTTCATGA
PROTEIN sequence
Length: 237
MLAASREREVLSVDRSLTKKISAALSPRKQPRQERSSKVVDRILDAALTLTREQGTKTPTTLAIAQRAGLSVGSVYQYYPNKEAILLDLARRWLGAFPEVIAKRIAAPRPTNRDEFQQEVDKLFVDTSKLYLDNANLMPVIEAITGNPDLRPIQNEYDEQIIALYAAWLQHVNPALEDGTASRLGVVMMEVGHVCRLVGLKRDRRAFDLIQDDVKTMWLALVAPYLDLKQNQEGFS*