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cn_combo_scaffold_1745_27

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(23773..24594)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368CB65 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 273.0
  • Bit_score: 499
  • Evalue 1.80e-138
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX24083.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 273.0
  • Bit_score: 463
  • Evalue 1.60e-127
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 273.0
  • Bit_score: 456
  • Evalue 3.80e-126

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGGTCGACGCATCCTCGTTGCTGTCGCGGCTGAAGCCCAATTCGGCTCGTACTCCGGCTGCGCCCGCTGTCGCGACCGGTGCCAAGAACGGCAAGTTCAAGGGCACGCTGATCGCCAAGGGCCTGACCAAGAGCTACAAGGGCAGGCAGGTGGTCAGCGGCGTGACGCTTGGCGTGCGCGCCGGCGAGGCGGTTGGCCTGCTCGGCCCCAACGGCGCCGGCAAGACGACCTGCTTCTACATGGTCACCGGCCTCGTGCCGGTCGATCACGGCACCATCGAGATCGACGGCTTCGATGTCACGGCGATGCCCATGTACCGACGCGCGCGGCTCGGCATCGGCTATCTGCCGCAGGAGGCCTCGATCTTCCGGGGCCTGACAGTGGAAAACAACATCCGTGCCATCCTCGAGGTCGTCGAGAAGAGCCGCAAGGAACGCGAGAAGACGCTCGATTCGCTGCTTGACGAATTCCACATCAGCCACCTGCGCAAATCGCCGTCCATTGCACTGTCCGGCGGCGAGCGGCGCCGACTGGAAATCGCCCGGGCACTGGCGAGCCGCCCGAACTACATGCTGCTCGACGAACCCTTCGCGGGCATCGATCCGATCGCGGTCGCCGACATCCAGCAACTGGTCAGGCATCTGACCCAGCGCGGCATCGGCGTGCTCATTACCGATCACAACGTTCGCGAGACGCTCGGTCTCATCGATCGCGCCTACATCATCCATGCGGGCGAGGTGCTGACGCACGGCCGCGCCGATGAAGTCGTCGCCAATCCCGACGTGCGCCGCCTCTATCTCGGCGAGGGCTTCACGCTCTGA
PROTEIN sequence
Length: 274
MVDASSLLSRLKPNSARTPAAPAVATGAKNGKFKGTLIAKGLTKSYKGRQVVSGVTLGVRAGEAVGLLGPNGAGKTTCFYMVTGLVPVDHGTIEIDGFDVTAMPMYRRARLGIGYLPQEASIFRGLTVENNIRAILEVVEKSRKEREKTLDSLLDEFHISHLRKSPSIALSGGERRRLEIARALASRPNYMLLDEPFAGIDPIAVADIQQLVRHLTQRGIGVLITDHNVRETLGLIDRAYIIHAGEVLTHGRADEVVANPDVRRLYLGEGFTL*