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cn_combo_scaffold_1815_1

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2..1258

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent protease n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FD007 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 418.0
  • Bit_score: 790
  • Evalue 7.90e-226
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1082933 species="Bacteria; Proteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 420.0
  • Bit_score: 753
  • Evalue 1.50e-214
heat shock protein HslVU, ATPase HslU similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 419.0
  • Bit_score: 751
  • Evalue 1.50e-214

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATCGGCCAGAAGGACGCCAAGCGCGCCGTGGCGATCGCGCTGCGCAACCGCTGGCGCCGCCAGCAGCTCGAAGGCCAGATGCGCGAAGAGGTGATGCCCAAGAACATCCTGATGATCGGACCGACGGGCGTCGGCAAGACCGAGATCTCGCGCCGTCTCGCCAAGCTCGCCGGCGCGCCCTTCGTCAAGGTCGAGGCCACCAAATTCACCGAGGTCGGCTATGTCGGCCGCGACGTCGAGCAGATCATCCGTGACCTCGTCGAAGTCGCCATCGGCCTGGTGCGCGAGAAGATGCGCGAGGACGTGAAGGCCCGCGCCCACATCAATGCCGAGGAGCGCGTGCTCGAGGCGCTGGTCGGCAAGACCGCCAGCCCCGCGACCCGCGACTCCTTCCGCAAGAAGCTCCGCGACGGCGAACTCGACGACAAGGAGATCGAGGTCCAGGTCGCCGACACCGGCACCGGCGGCATGCCGAGCTTCGACATCCCGGGCATGCCGGGCGGCAATGTCGGCGTGCTCAACATCAACGACATGCTGTCGAAGGCAATGGGCGGCCAGCGCACCAAGACGCGCAAGACCACCGTCAAGGATTCCTACGCACTGCTCATCCAGGACGAGTCCGACAAGCTGCTCGACCAGGACGAGGTGGTGCGCCGGGCACTCGAGGTGACCGAGAACGAAGGCATCGTCTTCCTCGACGAGATCGACAAGATCGCCCGCGGCGACGTCCACGGCGGACCGTCGCGCGAAGGCGTGCAGCGGGACCTGTTGCCGCTGGTCGAAGGAACGACGGTTGCCACCAAGTACGGGCAGATCAAGACCGACCACATCCTGTTCATCGCCTCGGGCGCGTTCCACATCTCCAAGCCGTCGGACCTTCTGCCCGAACTGCAGGGCCGCCTGCCGATCCGTGTCGAACTGAGGGCGCTGGACAAGGACGACTTCCGCCGCATCCTGACGGAGACTGAAGCGAGCCTGATCAAGCAGTACATCGCGCTGATGGCGACCGAGGGCGTGAGCCTCGACTTCACCGACGATGCCATCGACGCGCTCGCCGGCATCGCGGTCGATCTCAACGCCAGCGTCGAGAACATCGGCGCCCGGCGCCTGCAGACTGTGATGGAGCGAGTTCTCGACGAGATCTCCTACGACGCGCCCGACCGCAACGGCACGACCGTGACGATCGACGCGGCCTACGTGCAGAAACACGTCGGCGACCTGTCCAGGAACACAGATTTGTCGCGTTTCATCCTTTAA
PROTEIN sequence
Length: 419
IGQKDAKRAVAIALRNRWRRQQLEGQMREEVMPKNILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRDLVEVAIGLVREKMREDVKARAHINAEERVLEALVGKTASPATRDSFRKKLRDGELDDKEIEVQVADTGTGGMPSFDIPGMPGGNVGVLNINDMLSKAMGGQRTKTRKTTVKDSYALLIQDESDKLLDQDEVVRRALEVTENEGIVFLDEIDKIARGDVHGGPSREGVQRDLLPLVEGTTVATKYGQIKTDHILFIASGAFHISKPSDLLPELQGRLPIRVELRALDKDDFRRILTETEASLIKQYIALMATEGVSLDFTDDAIDALAGIAVDLNASVENIGARRLQTVMERVLDEISYDAPDRNGTTVTIDAAYVQKHVGDLSRNTDLSRFIL*