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cn_combo_scaffold_1815_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2386..2760)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036177BA similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 123.0
  • Bit_score: 207
  • Evalue 8.50e-51
Helix-turn-helix family protein {ECO:0000313|EMBL:AID33498.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 122.0
  • Bit_score: 188
  • Evalue 7.50e-45
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 122.0
  • Bit_score: 186
  • Evalue 4.40e-45

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGACGCCGCTTGGCGAACGCATCCGCGAGCTCAGACGCGAGCGCGGCGTCAGCCAGAAGGACATGGCCGCCGCCATAGGCGTCAGCGCGGCCTACCTGTCCGCGCTCGAGCACGGGCATCGCGGCGTACCCAGCTGGCCAATGATCCAGAAGATCATCGGCTACTTCAACGTCATCTGGGACGACGCGGAGGAACTCCAGAAGCTCGCCGAGGGTTCGCATCCACGGGTCGTGATCGATACGTCGGGCCTGTCGCCGGCTGCCACCGAACTCGCCAATCTCCTGTCGCGCGCGGTGGGTGAACTGGGCGAGGCGGAATTGCGGGACCTGTGCGGGCAACTGCGGGCGGCGCTCGGCCGCGACAAGGCCAGCTAA
PROTEIN sequence
Length: 125
MTPLGERIRELRRERGVSQKDMAAAIGVSAAYLSALEHGHRGVPSWPMIQKIIGYFNVIWDDAEELQKLAEGSHPRVVIDTSGLSPAATELANLLSRAVGELGEAELRDLCGQLRAALGRDKAS*