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cn_combo_scaffold_1853_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1354..2388

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E4973 similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 336.0
  • Bit_score: 423
  • Evalue 2.10e-115
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EXL02865.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aqu similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 338.0
  • Bit_score: 496
  • Evalue 3.60e-137
lpsE; lipopolysaccharide core biosynthesis glycosyl transferase LpsE similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 340.0
  • Bit_score: 420
  • Evalue 6.50e-115
  • rbh

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCGGGTCCTGCACTTCCACTTCGGCAAAGACGGCGGCGCGGAGCGGTTCTTCGTGCATCTGCTGAATGCCTTGGCCGAAAAAGGCGTCGAACAGACGATCGTGATCCGGCCCGGCCGCAAGTGGAAAACTGAAATCCACGGTTCAGTCGAGATACTCGAAAGCCACTTCCGGACAGCGTCGCCAGATCGCTTGCTGTTGCCGCTTCGAGTGAAGGCGTTGATCAAGTCGTGGAAACCGGACAGCATCCTGGGTTGGATGCCCAAGGGCGCAAAGCTCGTGCCCGGGAATGTGGAACCGCTTCGGCTCGCACGGCTCGGAGACTATCCGACATCACTGCGAAAGTTCCGCAATATCGATACGCTGGTCTGCAATACGCCGGGAATTGCCCATCACGTCCGGTCCATGGGATGGGACCGCGGGGTCGAGGTAATCTCAAACTTCACGAGCTTGGAGCGCCTGGCGCCTGTAGACCGCAAGTTGCTCGACACGCCGACAGATGCCTTCGTGATCTCTTCGATGGGACGGTTCGTTCCCCGAAAGGGCTTCGATGTTCTGATCCGCTCGCTGCTCGACTTGCCGGACGCCTATCTCTGGCTGATCGGTGGCGGTGAGGAGGAGGGCAACCTGAAAGGGCTTGCCGATCACCTTGGAGTCGCCGATCGGGTTCGGTTCGCCGGGTGGCAGAAGGAGCCGCGCCGCTTCGTCGCGGCAAGTGATTGCTTCGCCATGGCATCCAGCCACGAGCCTCTGGGCAACGTCATCCTCGAGGCCTGGGCGCAAGCCATACCGGTGGTTTCTACGAAGGCCGAGGGCCCGCTATGGTTCATGCGCCACGGAGAGAACGGCTTGATGGTCGACATCGGTGATCACAAGGCGTTCGCTGCCGAATTCGCGCGTATCCGGGCCGACAGTGAGCTTGCCGGCAGGCTGGTCTCCGGTGGGTTGGACACGCTTGAGCAGCAGTTCTCGGCGGATGCGGTCGCCCAGACTTACATCGATCTGTTTGTTTCTCGCTCCAAACGCGCCGCCTAA
PROTEIN sequence
Length: 345
MRVLHFHFGKDGGAERFFVHLLNALAEKGVEQTIVIRPGRKWKTEIHGSVEILESHFRTASPDRLLLPLRVKALIKSWKPDSILGWMPKGAKLVPGNVEPLRLARLGDYPTSLRKFRNIDTLVCNTPGIAHHVRSMGWDRGVEVISNFTSLERLAPVDRKLLDTPTDAFVISSMGRFVPRKGFDVLIRSLLDLPDAYLWLIGGGEEEGNLKGLADHLGVADRVRFAGWQKEPRRFVAASDCFAMASSHEPLGNVILEAWAQAIPVVSTKAEGPLWFMRHGENGLMVDIGDHKAFAAEFARIRADSELAGRLVSGGLDTLEQQFSADAVAQTYIDLFVSRSKRAA*