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cn_combo_scaffold_1964_9

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5407..5640)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B1595 similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 57.0
  • Bit_score: 91
  • Evalue 5.60e-16
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:KEQ52176.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 57.0
  • Bit_score: 93
  • Evalue 1.20e-16
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 57.0
  • Bit_score: 90
  • Evalue 2.00e-16

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGGTCGGAACCTGAACCAGATCATCGCCGAGCTTCCGCCCGAGCAGCAGGAACGTGTCGAGGCGCGCTATCAGGAATTGAAGCAGGAGGTCGAAGGCTTGCGTGAGCTGCGGCAGATCGCCGGCAAGGCGCAGGCCGACATCGCCACCGCGCTGAACATCAAGCATCCGGTGTGGCGTCCGGCCTCGGCGGTGTGGCGAAGGCCGCCGGCAGCGCCGCTGTCTCGCCTCTGA
PROTEIN sequence
Length: 78
MGRNLNQIIAELPPEQQERVEARYQELKQEVEGLRELRQIAGKAQADIATALNIKHPVWRPASAVWRRPPAAPLSRL*