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cn_combo_scaffold_2011_17

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 12898..14514

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000360BDCB similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 537.0
  • Bit_score: 1016
  • Evalue 8.70e-294
Choline dehydrogenase {ECO:0000313|EMBL:ESX78604.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 538.0
  • Bit_score: 904
  • Evalue 5.20e-260
glucose-methanol-choline oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 538.0
  • Bit_score: 893
  • Evalue 3.20e-257

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
ATGCAGACGTTCGATTTCATTGTCGTGGGCTCGGGCTCCGCCGGTTCGGTGGTGGCCGAGCGGCTGTCGGCGAGCGGGCGCTTCTCGGTGCTGGTGCTCGAGGCCGGCGGCAGCGACCGCCGCTTCTACGTCCAGATGCCCCTCGGCTATGGCAAGACCTTCTTCGACCCTGCGGTGAACTGGAACTACGCCGCCGACGCCGACCCCGGGCTTGCCGGCAACAGGGACCACTGGCCGCGTGGAAAAATCCTCGGCGGGTCGAGCTCGATCAACGCCATGGTCTGGATCCGGGGTGCTGCCGAGGACTTCGACGCCTGGCGCGACGCTGGCAACCCCGGCTGGGGCTTTGACGACCTGTTGCCCGCATTCAAGGCGATCGAGGACAACCAGGCAGGCGGCACCGACCTGCGCGGCACCGGCGGGCCGATACACGTCACCGACAACAGGAAGAAGGTGCATCCTCTCACCCACCGCTTCCTGGCGGCAGCGCAGGTGGCTGGCCTGCCGTTGAATCAGGACTTCAATGGCGAGGCCCAAGAGGGCGTCGGAATTTATCAAATCACCACCAGGGACGGCCGCCGCATGTCTGCGGCGCGCGCCTTCCTGCGCCCGGCGATGAAGCGTGCCAATGTCCGCGTCGAGACCAATGCGCTGGTGACCAGAGTTCTGTTCGAGGGGAAGCGCGCGATCGGCGTCGAGTACCTGCGGAACGGCGAGAAGAGGACCGCGCGCGCGGGACGCGAAGTGATACTGTCGGGCGGTTCGGTCAACACACCCCAGCTTCTCCAGCTCTCAGGCGTCGGCCCTTCCGCGCAATTGGGCGAACTCGGCATTCCGGTCGTGCACGCCAGCGAGCATGTCGGCCGCAACCTGCAGGACCACCAGGGGATCAACTACACCTGGAAAGCCAGGGTGCCGACGCTCAACCAGTTGCTGCGTCCCTGGTGGGGCAAGGCGCTGGCTGGCATGCAGTACCTGCTGCTGCGCTCGGGTCCGCTATCGATGAGCATGAACCAGGGCGGCGGCTTCTTCCGCACGGACCAGCATCGCGTCCGCCCCAACATGCAGCTCTATTTCCAGGTCTTTTCGACCGTGCTGCCCAAGGCCGGCGAGCGCCCGATCCTGACGCCCGACCCCTTCCCTGGCTTTTCCATCGGCCTGTCCAACTGCCGCCCGTCGAGCCGCGGCGAGATCATGATCCGCTCCGCCGATCCGACCGTCCAGCCGCGCATCACCGCCAACGCCTATTCGACCAACAGCGACGTCGCCGAGATGCTCGATGCGGTCAAATTCCTGCGCCGCATCGCCGCGCAGTCGCCCATATCGGACATCATCGCGGAAGAGGTTTTGCCAGGTCCGTCAATCACTTCCGACGCCGACTTGATTCTGGATTTCCGCAAGCGCTCGGGCACCGTCTACCACCCTGTCTCGACGTGCCGCATGGGACCGGACCCGGCCACCTCGGTCGTCGATCCGCGGCTGCGCGTGCACGGGCTTTCCGGCCTGCGCGTCATCGACGCCTCGATCTTCCCCGACAACATCACCGGCAACACCAATGCCGCCGCGATCATGACCGGCTGGAAGGGCGCCGAGTTGGTTCTGGAGGATGCGAAGTGA
PROTEIN sequence
Length: 539
MQTFDFIVVGSGSAGSVVAERLSASGRFSVLVLEAGGSDRRFYVQMPLGYGKTFFDPAVNWNYAADADPGLAGNRDHWPRGKILGGSSSINAMVWIRGAAEDFDAWRDAGNPGWGFDDLLPAFKAIEDNQAGGTDLRGTGGPIHVTDNRKKVHPLTHRFLAAAQVAGLPLNQDFNGEAQEGVGIYQITTRDGRRMSAARAFLRPAMKRANVRVETNALVTRVLFEGKRAIGVEYLRNGEKRTARAGREVILSGGSVNTPQLLQLSGVGPSAQLGELGIPVVHASEHVGRNLQDHQGINYTWKARVPTLNQLLRPWWGKALAGMQYLLLRSGPLSMSMNQGGGFFRTDQHRVRPNMQLYFQVFSTVLPKAGERPILTPDPFPGFSIGLSNCRPSSRGEIMIRSADPTVQPRITANAYSTNSDVAEMLDAVKFLRRIAAQSPISDIIAEEVLPGPSITSDADLILDFRKRSGTVYHPVSTCRMGPDPATSVVDPRLRVHGLSGLRVIDASIFPDNITGNTNAAAIMTGWKGAELVLEDAK*