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cn_combo_scaffold_2371_2

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1106..2914)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 602.0
  • Bit_score: 1124
  • Evalue 0.0
elongation factor 4 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037528D8 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 602.0
  • Bit_score: 1169
  • Evalue 0.0
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 601.0
  • Bit_score: 1098
  • Evalue 0.0

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGACCACACCGCTCGACCACATCCGCAATTTCTCCATCGTCGCCCACATCGACCACGGCAAGTCGACGCTTGCCGACCGGCTGATCCAGCTCACCGGCGGGCTGGAGGCGCGCGAGATGACCGAGCAGGTCCTCGACAACATGGACATCGAGCGCGAGCGCGGCATCACCATCAAGGCCCAGACCGTCCGCCTCAACTACAAGGCCAAGAACGGCGAGGACTATGTCCTCAACCTCATCGACACGCCCGGCCACGTCGACTTTGCCTATGAGGTGTCGCGCTCGCTGTCGGCCTGCGAGGGCTCGCTGCTCGTCGTCGACGCCAGCCAGGGCGTCGAGGCCCAGACGCTCGCCAACGTCTACCAGGCCATCGACAACAACCACGAGATCGTGGTCATCCTCAACAAGATCGACCTGCCCGCCGCCGAGCCCGAGCGCATCAAGGAGCAGGTCGAGGAAGTCATCGGCATCGACGCCTCCCAGGCCGTCCACATCTCGGCCAAGACCGGCCTCGGCATCGAGGACGTGCTGGAGGCGATCGTCACCCAGCTGCCGCCGCCGCGCGAGGGCGACATCGACGCGCCGCTCAAGGCGATGCTGGTCGACAGCTGGTACGACACCTATCTCGGCGTCATCGTGCTCGTCCGCGTCATCGACGGCAGGCTCAAGAAGGGCCAGACCATCCGCATGATGGACACCAACGCCAAGTACCTGGTCGAGCGCACCGGCGTCTTCACCCCCAAGATGGTCCAGGTCGACGAGCTCGGCCCCGGCGAGTTCGGCTTCTTCACCGGCTCGATCAAGGAAGTGGCCGACACCCGCGTCGGCGACACCATCACCGAGGACAAGCGCCCCACCGCAAAGGCCCTGCCGGGCTTCAAGCCGGCCCAGCCGGTGGTGTTCTGCGGCCTGTTCCCGGTCGACGCCGCGGACTTCGAGGACCTGCGCGCCGCCATGGGCAAGCTGCGCCTCAACGACGCCAGCTTCTCGTTCGAAATGGAAACTTCGGCCGCCCTCGGCTTTGGCTTCCGCTGCGGCTTCCTCGGCCTCCTGCATCTCGAGATCATCCAGGAGCGGCTGGAGCGCGAGTTCAACCTCGACCTCATCGCTACCGCGCCCTCGGTCGTCTACCGCATGAACCTCAACGACGGCTCGACCAAGGAACTGCACAACCCCGCCGACATGCCCGACGTGGTCAAGATCGCCTCGATCGAGGAGCCGTGGATCCGCGCCACCATCCTCACCCCCGACGACTATCTCGGCTCGATCCTGAAGCTCTGCCAGGAGCGCCGCGGCATCCAGGCCGACCTCTCCTATGTCGGCAAGCGCGCCATGCTGGTCTACGACCTGCCGCTCAACGAAGTCGTGTTCGATTTCTACGATCGCCTCAAGTCGATCTCCAAGGGCTACGCCTCCTTCGACTACCACCTCACCGACTACCGCGAGGGCGACCTCGTCAAGATGTCGATCCTGGTCAACGAGGAGCCGGTCGACGCGCTCTCGATGCTCGTCCACCGCACGGCGGCCGAAAAGCGCGGCCGCGTCATGGTCGAGAAGCTGAAGGAGCTGATCCCGCAGCACATGTTCAAGATCCCGGTCCAGGCCGCCATCGGCGGCAAGGTCATTGCCCGCGAGACCATCTCGGCGCTGCGCAAGGACGTCACCGCCAAGTGCTACGGCGGCGACGTCACCCGCAAGCGCAAGCTGCTCGAGAAGCAGAAAGAGGGCAAGAAGCGCATGCGCCAATTCGGCAAGGTCGACATCCCGCAGGAAGCGTTCATCCAGGCGCTCAAGATGGGCGATAGCTGA
PROTEIN sequence
Length: 603
MTTPLDHIRNFSIVAHIDHGKSTLADRLIQLTGGLEAREMTEQVLDNMDIERERGITIKAQTVRLNYKAKNGEDYVLNLIDTPGHVDFAYEVSRSLSACEGSLLVVDASQGVEAQTLANVYQAIDNNHEIVVILNKIDLPAAEPERIKEQVEEVIGIDASQAVHISAKTGLGIEDVLEAIVTQLPPPREGDIDAPLKAMLVDSWYDTYLGVIVLVRVIDGRLKKGQTIRMMDTNAKYLVERTGVFTPKMVQVDELGPGEFGFFTGSIKEVADTRVGDTITEDKRPTAKALPGFKPAQPVVFCGLFPVDAADFEDLRAAMGKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVVYRMNLNDGSTKELHNPADMPDVVKIASIEEPWIRATILTPDDYLGSILKLCQERRGIQADLSYVGKRAMLVYDLPLNEVVFDFYDRLKSISKGYASFDYHLTDYREGDLVKMSILVNEEPVDALSMLVHRTAAEKRGRVMVEKLKELIPQHMFKIPVQAAIGGKVIARETISALRKDVTAKCYGGDVTRKRKLLEKQKEGKKRMRQFGKVDIPQEAFIQALKMGDS*