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cn_combo_scaffold_2379_13

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9635..10180)

Top 3 Functional Annotations

Value Algorithm Source
peroxiredoxin n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D2D8F similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 1.30e-95
Peroxiredoxin {ECO:0000313|EMBL:KGD99939.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 178.0
  • Bit_score: 335
  • Evalue 5.50e-89
putative peroxiredoxin similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 178.0
  • Bit_score: 323
  • Evalue 4.40e-86

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGATCGGGAAGAAAGTTCCTTCCGTCACCTTCCGCACGCGCGTTCGCGACGAGTCCGTCGGCGGCCCGAACCCCTTCCGCTGGGAAGACAAGACCTCGGCCGACTACTTCGACGGCAAGCGCGTCGTCCTGTTCTCGCTGCCGGGCGCCTTCACGCCGACCTGCTCGACCTACCAGCTGCCCGATTTCGAGAAGCTGTTCGGCGAGTTCCAGGCCCAGGGCATCGACGAGATCTACTGCGTCTCGGTCAACGACGCCTTCGTCATGAACGCCTGGGGCAAGTCGCAGAACCTTGACAAGGTCAAGCTGATCCCGGACGGCTCGGGCGAGTTCACGCGCAAGATGGGCATGCTCGTCGCCAAGGACAATCTCGGCTTCGGCATGCGCTCGTGGCGCTACGGCGCCGTCATCAACAACGGCCGCATCGAGAAGTGGTTCGAGGAAGAAGGCTTCTCGGACAACTGCGACACCGATCCATACGGCGTCTCCTCGCCGCAGAACATCCTCGAGGCGCTGAAGAACGACGGCGTCGCCGAAGCCGCCTAA
PROTEIN sequence
Length: 182
MIGKKVPSVTFRTRVRDESVGGPNPFRWEDKTSADYFDGKRVVLFSLPGAFTPTCSTYQLPDFEKLFGEFQAQGIDEIYCVSVNDAFVMNAWGKSQNLDKVKLIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYGAVINNGRIEKWFEEEGFSDNCDTDPYGVSSPQNILEALKNDGVAEAA*