ggKbase home page

cn_combo_scaffold_2504_20

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(23156..26695)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein VasK n=1 Tax=Hoeflea sp. 108 RepID=UPI0003726680 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 999.99
  • Bit_score: 2098
  • Evalue 0.0
Type VI secretion protein VasK {ECO:0000313|EMBL:ESZ14340.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 999.99
  • Bit_score: 1997
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 999.99
  • Bit_score: 1946
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3540
ATGTTCATCCTCCGCTTCCTCTGGTCGGTCCTGACTTCGCGGTGGCTCTGGACGCTGATAGGGCTCGCCCTGCTCTCGCTCATCATCTGGATATTCGGCCCGATCGTGGCAATCGGCAGGAGCACGCCCTTTGCCTCCGAGACCGTCCGCATCGGGATGATCGCCGGACTGCTTATCCTGTGGCTGATCTGGCTCATCATCGCGCAACGCCGTGCCATCCGCGCCAACCGCGTCTTCGTGGCCGAGATCGCAGCAACACCGGTCGAAAAACCGCTGACCCCGGGGGAAGAAAGCGTCGCGGCCGTCGGGGCCAAGTTCCAGAACTTGATGGACGAGCTGAAGCGGCGCAAGCTGGGCGGCAGGAAGTTCCTGCGCGAAATGCCCTGGTACGTGATCGTCGGGCCGCCCGCCACCGGCAAGACGACGGCGCTCAGGCAGTCGGGCCTCAACTTCCCGATCGATCTCACCGACGATCTCCACGGAGTCGGCGGCACGCGCAATTGCGATTGGTTCTTCGCCGAGAGCGCTGTGCTCATCGACACGGCCGGCCGTTACGTTCAGCAGGAAAGCCAGCCAGACGTCGATGCCGCCGAATGGCTCGGATTCCTGGACCTGCTCAAGAAGCACCGCGGCCGGCGCGCCCTGAACGGCGTGATCGTCGCCCTTTCTATCGACGCCCTGTCCGAGGGCGACGACGCGATCAAGGCGCATGGCCGCAAGATTCGCAGGAGGCTCGCCGAACTCAACGAGCGCCTAGAAATCCGCCTGCCGGTCTATCTGATGCTGACCAAGGCGGACCTCATCAAAGGGTTCGAGGCTTTCTTCGACAGCCTGTCTACGACGGCGCGCGAGCAGGTCTGGGGCAGCACCTTTGCGCCGGACGCCAGGGTCGACGCCAGCGCCGTGGCAGGTGAGATCGGGACGCTGGCCGGCGAACTCGAAAGGCGGCTCGTGCCGCGCCTCGAGGAAGAGGACAATCTCGCCGACAGGGCCGAGATATTCAGGTTCCCGGCGCAGGTCCAGAGCCTGTCCGATCCGATCAGGCTCCTGGTCGAGTCGATCTTCGGGGAAAGCCGCTATGAGGACAGCGCCTGGCTGCGCGGCATCTACCTCACCTCCGCGACCCAGGAGGGCGCGCCGATCGACCGGTTGGCGGCTTCGCTCTCTTCTTCCTTCGGGCTGCCGCAGCGGCGCAGCGTGGTTTCGCCTCGGATTGAAAGACGCTCCTTCTTCCTCAAGAACCTGCTCACCGAAGTGATCTTCAAGGAAGCGGGCCTCGGCACCTTCGATCCCATGGCGCAGAGGCGTCGGACATGGATCTGGCGCGGCGCGGCAGCGGCTTCGGCGGCGGCAGTCTTGCTCGCCGGCCTGCTATTCGGCCTTTCCTACTACGACAATCGCGGTGCGATCATGGCCCAGGCCGGTCAGTTCGAGGCCCTGCAGGGCTCGCTTGCGCCGGTCGCGAACAGTCCCGCACCGGTGGATGCTCCGGATATCGACGTCGCCCTGGCCGCCGTTTCGGAGGTTGCGAACGCCCGCACGCCTCCGCCAGCGGCGATGCGCAACCTGGTCGGCCCCACGGCCTCGCCGGAACTGCTCCGGGCACAGACAGACGCCTACAACCACGCCCTGCGCGACATCCTCGAACCGCGCATGGTCGCGCTGCTGGAAACCACGATGTGGCGGCAGATCCGCGACCCGGAATTCATGCTCGGGGCGCTCAAGACCTATCGCATGATGACCGGCCTCTCCCAGATGGACCCCGATTTCGCGCAGGATTGGTGGGTAAACCAGCTGCCGGATTACGCACCGGTCGCGCCATTCCCGACGCCGGACGCGGAAGAGCATCAACTGGCAGCGATGCGCCGGATGACGGTGGACGACAGCTATGTCGCGCCGGACCAGTCGCTCGTGGCGGAAGCCCTCAAGAGCGTGTGCACCATTTCGCTGCCGGCGCGGGCCTACAAGCAACTGCTGGCCGATCCCGAGGTCGCGGGGATCAAGGAATGGATACCTGCCAATTTCGCCGGGCCGAACGGATCGAAGGTCTTTGCCCGCCGCACGGACAAGACACTGCGCGTCGGCCTTCCCGGCGCCTTCACCTATGCTGGTTTCCACGACGCGATCCTCGACCGGCTGGAGGACGTCGCAGGTCAGGCCGCGCTGGATCGGGCGGTGTTTGCGGGCGGCTGCGAGGAGAACGCGGAAACCTCCGTGTCGGCGCTCTCCGAGGACATTCTCAAGCTCTACTACGAGGACTTCATCGCGCAATGGGACAGCTTGTTGCGGGACATTCGGCTCGCCCCCCTCACCGACCTCAACGTCGCCAGCGACAACCTCAAGGACTTGTCGAGCGCGGATTCCGCACTCAAGCGGCTGGTTTCCGCCGTAGTGCGGGAAACCGAACTCACCCGCTCCGACGAGGAGCAGCCGGCCGACGACAAGGCGGCGTCGAAGGGCGCATCGAAGCTGCTGGGCAAGCTCGGCAAGGTCGGCAAGCTGGCCAAGGCGGGCGCAAAGCTCCTGCCCCGCGCCGGATCGGCCGACGAGGTGGACATGACAGGCTCGCTGGTTGCCGAGCATTTCAAGCCGCTCAAGGGAGCCGTGGCCGAGGTCGACGGTCAGCCCCCGGCACTCGACTCGGCGGTGGTGGCGATGACTGCGCTGTCCAACGTGCTGCAGACCGTCACCGCCAGCCCAGATCCGCAGGATGCCATCAAGAAGCAGGGCGGGCTTGCCGAACTCACCGGTGCGGTGGCGCGGCAGGCGCAGATCCTGCCCGACCCGATCGACGACTGGCTCGGCGGGATAGCAGGCGACACCAGCGGGCTGACCGAGAAGGCAGTGACCTCGGAACTCAACGCAATCTGGCGCGCCGACATCCTGCCGTTCTGCCAGGCAGCGCTGACCGACCGCTATCCTTTCACGCCTGGCAGCGCCGTCGACGTGAACGTGCGCGACTTCGCCCGCCTGTTCGGTCCCGGGGGGATGATCGACGCCTTCACCAACGATCACCTCATCAGCTATGTCGACACGGCGGCGAAGCCGTGGAAGTGGCGCGCGGATTTCGGGCTCGATTCCTCCGCGCTGGCGGCCTTCGAGCAGGCCCGCCGCATCCGCGACGACCTGTTCCCGGGCGGCACCGGCCCGACCATGAGCTTCACGCTCGAGCCGAAGGATCTTTCACCTGCGGTCACGCGCATGACGCTCAACCTCGATGGCCAGAGCCTCGTCTACTACAACAACGCGACGCGCCCCCAACCGATGACCTGGCCCGGCAAGGACGGGACCGGCACGATTTCGCTCGCCTTCCAGCCGATCGACGGGTCGCCGGAGGTGATCGTCAACGAGACGGGGAGTTGGGCGTGGCTCAGGATGCTCAACAACGGGCGCTTTACCGGCACAGCCCTGCCCGACGTCTACAAGCTGAGGCTCGGAGCGCAAGATTTCTACGCCGACTTCGAGCTCAAGGCCGCGAGCGTCGAGAACCCCTACAGTCTGCAGATGTTCAAGAGGTTCACATGCCCGCCGAACATCTAG
PROTEIN sequence
Length: 1180
MFILRFLWSVLTSRWLWTLIGLALLSLIIWIFGPIVAIGRSTPFASETVRIGMIAGLLILWLIWLIIAQRRAIRANRVFVAEIAATPVEKPLTPGEESVAAVGAKFQNLMDELKRRKLGGRKFLREMPWYVIVGPPATGKTTALRQSGLNFPIDLTDDLHGVGGTRNCDWFFAESAVLIDTAGRYVQQESQPDVDAAEWLGFLDLLKKHRGRRALNGVIVALSIDALSEGDDAIKAHGRKIRRRLAELNERLEIRLPVYLMLTKADLIKGFEAFFDSLSTTAREQVWGSTFAPDARVDASAVAGEIGTLAGELERRLVPRLEEEDNLADRAEIFRFPAQVQSLSDPIRLLVESIFGESRYEDSAWLRGIYLTSATQEGAPIDRLAASLSSSFGLPQRRSVVSPRIERRSFFLKNLLTEVIFKEAGLGTFDPMAQRRRTWIWRGAAAASAAAVLLAGLLFGLSYYDNRGAIMAQAGQFEALQGSLAPVANSPAPVDAPDIDVALAAVSEVANARTPPPAAMRNLVGPTASPELLRAQTDAYNHALRDILEPRMVALLETTMWRQIRDPEFMLGALKTYRMMTGLSQMDPDFAQDWWVNQLPDYAPVAPFPTPDAEEHQLAAMRRMTVDDSYVAPDQSLVAEALKSVCTISLPARAYKQLLADPEVAGIKEWIPANFAGPNGSKVFARRTDKTLRVGLPGAFTYAGFHDAILDRLEDVAGQAALDRAVFAGGCEENAETSVSALSEDILKLYYEDFIAQWDSLLRDIRLAPLTDLNVASDNLKDLSSADSALKRLVSAVVRETELTRSDEEQPADDKAASKGASKLLGKLGKVGKLAKAGAKLLPRAGSADEVDMTGSLVAEHFKPLKGAVAEVDGQPPALDSAVVAMTALSNVLQTVTASPDPQDAIKKQGGLAELTGAVARQAQILPDPIDDWLGGIAGDTSGLTEKAVTSELNAIWRADILPFCQAALTDRYPFTPGSAVDVNVRDFARLFGPGGMIDAFTNDHLISYVDTAAKPWKWRADFGLDSSALAAFEQARRIRDDLFPGGTGPTMSFTLEPKDLSPAVTRMTLNLDGQSLVYYNNATRPQPMTWPGKDGTGTISLAFQPIDGSPEVIVNETGSWAWLRMLNNGRFTGTALPDVYKLRLGAQDFYADFELKAASVENPYSLQMFKRFTCPPNI*