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cn_combo_scaffold_2504_21

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(26700..28022)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038047B3 similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 441.0
  • Bit_score: 737
  • Evalue 8.40e-210
Uncharacterized protein {ECO:0000313|EMBL:CCV06228.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 440.0
  • Bit_score: 703
  • Evalue 1.90e-199
type IV / vi secretion system protein, dotu family similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 440.0
  • Bit_score: 683
  • Evalue 5.30e-194

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Taxonomy

Mesorhizobium metallidurans → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGAGCCAGGACGATCCTTTCGGATTGTCGGAGGATCGCGAACGCACCCGCATTCGCATGGCAGCCGCGCCAATGCCGCGCGGCCTCCGCGCTGCCGCTCCAGCGGTGCCCATCAACCGGTCGCGGGCGCATCCCAACAAGCTGGTCAACGCCTTCTCGACGCTGCTTGAATTTGCGCCGGAGCTCGAAAGTGCGCTACCGCCGGAGAACCCGGAAGCGCTGCGGACGCGACTGATCGAGGAACTGGTGCGAGCCCGGGACGCCGCGATCGCCTCCGGCTCGTCGCTCGAACGTGCGGACCAGGCCGCATGGTCGGTCGCAGCACTCCTCGACGATCTCGCCCTCAACACCCCTTGGGGCGGCGCCAGCGCTTGGCCGCGCCAGCCGCTGGTCGTGATGCTGCGCGGTGATGTCGACGCCGGAGCCCAGTTCTTTTCACGACTGGACGAACTGGAACGGCACCCCAACCGCGACAGGGAGATGCTGGAACTGCAATATCTGTGCATGGCCCTGGGCTTTCGCGGCAAGTACCGGGTGCCGGGCCGCGCGGGTGATCGGTCGCTCAATGCGGTCCGGGTCGCGGCCGCGCGCTTCCTGCGCGATGCCGATGCGGAAGATGCGCCGCTCTCGCCTCATTGGAAGGGCGTGGTGGCATCGGACGAACCACAGCGCTTCACCGTGCCGATCTGGGTCATGGGGGCGATCGCCGCGGTACTAGGCACCGGCATCTACGTGGCCCTCTCCATGGCGCTGAGCGCCCAGTCGGAACAGCTCTCGGCGCTGGTGCGGGCGTTGCCGCCGGCACAGCGCGCCGAACTTCTCCGTTCAACTCCCCAGGCCGGGGCGCCGCTGGTAGAGAAGGTTGATTTCGCCCTTCTGCCTGCATTCGAAGCCGCCGCGCCCGAGGGGCTGCGCCCGGCGCTGCGCGGAACCGAAAGCGTGTCGCTTGCCAAGCTCGTCATCCAGGCGACCAACCCGGAGCTTTTCCAGTCGTCGCGGGCCGAAATCACGGATGGCTTCCAGCCGCTGATCGGGGCGATCGCCAGGGTGATCATCGAGAACCAGGAGTTGATAGGCAATATCACAGTCGTTGGTCACACGGACGGCATCCCGCTGCAGAGGAGCAACCCGCTGTCGACCAACCAGCGCCTGTCGGAAGCACGTGCCGCGACGATCGCAGACCTGCTCGTTCAGAACGGCGTGGCGCCTGAACGCGTGCGCTCGGAGGGGCGCGCTGCGACCGATCCGGTGGCCGACGACGCCACCCGCGAAGGCCGAGCGCTGAACCGCAGGGTCGAGGTTCTCGTCGAGAAGAGGCTGTAG
PROTEIN sequence
Length: 441
MSQDDPFGLSEDRERTRIRMAAAPMPRGLRAAAPAVPINRSRAHPNKLVNAFSTLLEFAPELESALPPENPEALRTRLIEELVRARDAAIASGSSLERADQAAWSVAALLDDLALNTPWGGASAWPRQPLVVMLRGDVDAGAQFFSRLDELERHPNRDREMLELQYLCMALGFRGKYRVPGRAGDRSLNAVRVAAARFLRDADAEDAPLSPHWKGVVASDEPQRFTVPIWVMGAIAAVLGTGIYVALSMALSAQSEQLSALVRALPPAQRAELLRSTPQAGAPLVEKVDFALLPAFEAAAPEGLRPALRGTESVSLAKLVIQATNPELFQSSRAEITDGFQPLIGAIARVIIENQELIGNITVVGHTDGIPLQRSNPLSTNQRLSEARAATIADLLVQNGVAPERVRSEGRAATDPVADDATREGRALNRRVEVLVEKRL*