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cn_combo_scaffold_2504_23

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(29402..29854)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370DA50 similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 150.0
  • Bit_score: 265
  • Evalue 4.20e-68
Type VI secretion protein {ECO:0000313|EMBL:ESZ14343.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 150.0
  • Bit_score: 256
  • Evalue 2.70e-65
type VI secretion lipoprotein, vc_a0113 family similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 150.0
  • Bit_score: 248
  • Evalue 1.10e-63

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Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGATCGACCGGCGCGACTTCATTCTGGCACTTGGTGCGACGGGCCTGGTTGCCGCTTGCCAGAGCGGACCGCCCAAACCGTCCACTGTGACCGTCAATGTGAGCGGCGAAGCCGGGATGAACCCGGGGCCGGACGGCAGCGACCGGCCCGTCACGGTCCTGATCATGCGCCTGCGCAGTGCAGGCAAGTTCAATTCGGCCGACTATTTCGCCTTGCAGGGAGACGCTGCCGGCACGCTTGGCGGCGATCTCATCGGTTCGGATCAGATAGCGGTTGGTCCGGGCAAGGCCGCTTCCAAGACCATCACGGTGGAACCGGACGCCACGGCTCTGGGCTTCGTCGCTCTCGTCCGCGAGCCTGGTGGGCGAACCTGGCGGACGGCCAAGTCGGTGTCGCCGGGATCGACTGTGACGATTGCCGTCAGGCTCGGTGCCGGAGGCATATCGGCCTAG
PROTEIN sequence
Length: 151
MIDRRDFILALGATGLVAACQSGPPKPSTVTVNVSGEAGMNPGPDGSDRPVTVLIMRLRSAGKFNSADYFALQGDAAGTLGGDLIGSDQIAVGPGKAASKTITVEPDATALGFVALVREPGGRTWRTAKSVSPGSTVTIAVRLGAGGISA*