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cn_combo_scaffold_2604_16

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(15677..16408)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Citreicella sp. SE45 RepID=D0DCP1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 240.0
  • Bit_score: 195
  • Evalue 6.60e-47
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EEX12232.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Cit similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 240.0
  • Bit_score: 195
  • Evalue 9.20e-47
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 234.0
  • Bit_score: 186
  • Evalue 1.10e-44

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Taxonomy

Citreicella sp. SE45 → Citreicella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCGCGTCAGGCAGATCGACAATGTCCTCGATTTGTTCGAGATATTTGCGCGCGATCGGTCGCCGCTTACCCTGACGGCTTTGTCCCAGACGCTGGGCATTCCCAAATCGAGCACCTTCAATGTCATCGAGACGCTTGTAGGGCGCGGCTTCCTGTATGAGACCAAGCCGAGGGGCGGCTATTATCCGACGCAGCGCCTTTTCGAATTGGCGCGCTCGATGATGGACGGCGACCTGTTGATCGCTCGCATTCACAGCCATCTGGAGGAACTCGCAGCTGCAACAGGCGAGACTGCCGTGCTGTCTGCCCGCGAGCAGGACGACGTGGTTTATGTCGACGTCGTCGAGTCAGCCGCTCCGATCCGCTATTTTGCCAAGGTCGGAGAGCGGCGGCCGATCTACACCACCTCGAGCGGCAAGGCCATCCTGACCACCTACGAGCTGGCGGAACGGGCGGACATACTCCGCGGGTTGCGCTACTTCCCCTACCAGCCGGCGACGAGAAAGGGGGCGAGCGAATTGGCGACGGACCTCGAGAAATCGATCGGTCGCGGGTGGTGCGAGGACGTTGCGGAATCGACGCCCGACGTCATGGGGTTCGGCGTGCCGCTCATGACGGGGGGGCGCCGCTTCGGATTGGCAGTTGCCGGTCCGATCTGGCGCATGCAGAACAATCGAGACGTACTGGTGGCGCATCTTCGCGCGGCCGCCGCACAGATAGGTGACAAGTAG
PROTEIN sequence
Length: 244
MRVRQIDNVLDLFEIFARDRSPLTLTALSQTLGIPKSSTFNVIETLVGRGFLYETKPRGGYYPTQRLFELARSMMDGDLLIARIHSHLEELAAATGETAVLSAREQDDVVYVDVVESAAPIRYFAKVGERRPIYTTSSGKAILTTYELAERADILRGLRYFPYQPATRKGASELATDLEKSIGRGWCEDVAESTPDVMGFGVPLMTGGRRFGLAVAGPIWRMQNNRDVLVAHLRAAAAQIGDK*