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cn_combo_scaffold_3392_13

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(13172..13825)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037526A3 similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 217.0
  • Bit_score: 386
  • Evalue 1.40e-104
Transcriptional regulator {ECO:0000313|EMBL:ESZ19580.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 219.0
  • Bit_score: 327
  • Evalue 1.10e-86
two-component response regulator protein similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 219.0
  • Bit_score: 324
  • Evalue 1.80e-86

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Taxonomy

Mesorhizobium sp. L2C084A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAATCGCCCGCTCACCGCCATCCTCGCCGACGACCACGCCATTGTCCGCGAGGGCCTCAAGCTGTTGTTCTCGGCGGTGGACAACATCGCCATCGTCGCCGAGGCGGCGGACGGCGAAGCTTTGCTGAGGCATGTCCGCGACGTGCGCGCGGATCTTTTGATCCTTGATCTCGGCATGCCGGGCGTCGCCGGGATCCAGTTCATCTCCGACATCAGGGAACTGGCGCCGCGCCTGAAGATCCTGGTGCTGACCGCCAACATCGAGCCGCGGACGGTGCGCGCGGCGATCGAGGCCGGAGCCAGTGCCTACCTGACCAAGGATGGCGACCCCGAGGAACTGGTCGCCGCCATCGAGGCGGTGAAGCAGGGTGGAACCTATCTGGCGCAAACCGTGCGCTTCGCGATCAGCGAACCGAACCGCAACGGCATGCCCACGCAGGAGATCGTGTCGCCGATCCCTCTGACGCGACGCGAGCGCCAGATCCTCGGCCTGGTGGCGCATGGCATGACCGCGCGCGAGGTTGCGGAGCGGCTTGGCATCAGCCCGCTGACCGCGCGCAAGCATCGGGAGAACCTGATGCGCAAACTCGATCTCCATAGCGCCGCCGAACTCACCACCTATGCGGTTCGCCTGGGACTGCCAGCCGGCTGA
PROTEIN sequence
Length: 218
MNRPLTAILADDHAIVREGLKLLFSAVDNIAIVAEAADGEALLRHVRDVRADLLILDLGMPGVAGIQFISDIRELAPRLKILVLTANIEPRTVRAAIEAGASAYLTKDGDPEELVAAIEAVKQGGTYLAQTVRFAISEPNRNGMPTQEIVSPIPLTRRERQILGLVAHGMTAREVAERLGISPLTARKHRENLMRKLDLHSAAELTTYAVRLGLPAG*