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cn_combo_scaffold_4201_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 9196..14640

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B0BB8 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 2838
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:CCV07871.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 999.99
  • Bit_score: 2428
  • Evalue 0.0
large extracellular alpha-helical protein similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 2394
  • Evalue 0.0

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Taxonomy

Mesorhizobium metallidurans → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 5445
ATGCGTGCGGCGCGTGTATTTCCTGTATTCGTTCTTGCTCTACTCGCCTGGACCCTGGGAGCGGCTGCGGCCGAGAACCGGCGCGTCGTGACGAGCGAGAACGGCGACTATTTCGGCTTCGACCTGAGATCGGAGCAGAACGTCACGCTCGACCAGTGCCAGACCTCGTGCCTGGGCGATTCGGCCTGCCGCGCCTTCACCTACAACACGAAGGCCAAGTGGTGCTTCCTCAAGTCGGACTTCGCTACGCTCAAGCCGTTCAACGGCGCGGTCGCCGGCAAGGTCGTGCCGATCAGCGGCGATCCCGACATCGGCGCGCCTGCCGAGCTTTCGTTCTTCCCGGCCTCGATGGTCGACGAGGCCCGCCAGTTCCGCAACGGCCTCGTCGACAATGGCATCGTCAATCCCGATGAAGGCCTGGCATCGCTGACCGACGCCGGCGAAACCGCCCTGCAGGCCAATGACGGCCGCACCGCTATGCAGAAGTTCCGCGCCGCAGCCATCATCCTGCCTGATGACGTGGCGATCTGGACCAGGCTCGCCCGCGCCGTACAGATGACGACGCCCAATGACGGCAACGAAACCGCCAGCCTGCAGCGCGACGGCACCTCTTCCGCCTACAACGCCTATCTGTTGTCGCGCACCGCAGCCAACCGCGCCGAGAGCCTGATGCTGCTCGCGCGCGGGCTCGACAAGCGCGACATGTTCCGCCCGGCCCTCCAGACCTACGAGGCGAGCCTGGCGCTCGACAATTCGGCCAGCGTCCGCGCCGAATACGAGGACCTCAAGGCGCGCAAGGGCTTCCGCGTCGTCGACCATACCATCGACGCCGACACCACCTCGCCGCGTGTCTGTGCCCAGTTCTCCGAGGCGCTGGTGAAGGCCGGCGTCGACTACACGCCCTTCGTGACCGTCGATGACGCAGCCCCCAAGGCCGTCGAAGCCAAGGACCAGCAGATCTGCGTCGAGGGGCTGGAGCACGGCAAGCACTATCGCGTCACCTTCCGCCCGGGCCTGCCGGCGGCGATCGGCGAGGTGCTGACAGCGCCCGTGGTGCTCAGCGTCTATGTGCAGGACCGCGCGCAATCGGCGCGCTTCACCGGCGACAGCTTCGTGCTGCCCTCGACCGCCCGCCGTGGCATCCCGGTGGTGACGGTCAACATGGACGCCGCCGACATGAAGCTCTACCGCGTCGGCGACCGCTCGCTGGCGCAGTTGCTCTCTGGCTACCAGTTTCTCCGCCAGCTCGACAGCTATGACCTGTCGAGCATCTCCGACCAGATGGGCGAGCCAGTGTGGGAAGGCCAGCTCGTCATCGCCAACGAACTCAACAAGGAGGTGACGACCTCCTTCCCCGTCGATGAGGCCCTGCCCAACCGCAAGCCGGGCGTCTATGTGTTGACCGCCCAGCCGCCCGACGACAGGAGCGACGACTGGGCGAGCAAGGCGACGCAGTGGTTCGTCGTCTCCGACATCGGGCTTTCGACATACACCGGCGAGGACGGCCTCAACGTCTTTGCCCGTTCGCTCGCGACCGCAAAACCGATCGCCGACACTGAACTCACCCTTCTCGCCCGCAACAACGAGATCCTGGGCACGGCGAAGACCGACGCCGAAGGCCGCGCGACGTTCACACCCGGCCTGACCCGCGGCGACGGCGGCCTCGCGCCGGCCGTGCTGATGGCGAGCCAGGGCGACAGCGACTTTGTCTTCCTCGACATGACCCGGGCCGGCTTCGACCTGTCCGACCGCGGCGTCACCGGCCGCGCCGCCCCCGGCGCGCTCGACGTCTATGCCTGGACCGAGCGCGGCATCTACCGCGTCGGCGAGACTGTGCATTCCGCAGCCCTTGCCCGCGACGACGCGGCACTAGCCAGCGACCTGCCGCTGACCTTCATCTTCACCCGTCCCGACGGCGTCGAGGACCGGCGCATCGTAAGCCAGGGCGGCAAATCAGGCGGCCATGCCGTCGACCTGCCGCTGTCATCGGCCGCCATGCGTGGCACCTGGACGCTCGCCATCTACACCGATCCGAAGCAGCCGGCGATCGCCAGCCAGATGTTCCTGGTCGAGGACTTCGTGCCGGACCGGATCGAGTTCGACCTCACCGCCGACCGCAACGAGATCGCGGTGGGCGAAACCGCTGAAGCCACGGTGGACGGGCGCTTCCTCTATGGCGCGCCGGCCGCAGGCCTTGCGCTCGAGGGCGAAGTGACGCTTGCGACCAAGCGCGAGTGGGACGCCTTCAAGGGCTACTATTTCGGCCTCGCCGACGAGCAGCAGGGCGAAGCGACCCGCATTCCGCTCACCGACTTGCCCCTGGTCGGCGACGACGGCAAGGCGACCTTCCCCGTCGAGGTCGGCCAGGTGCCCTCGACCACGCGCCTGATCAACGCGGCGCTGACGGTGCGCATGCGCGAGACAGGCGGCCGCGCCGTCGAGGAAAGGCTCGACATCGGCATCCTGCCGCAGGGCACGATGATCGGCATCCGGCCGGACTTCTCCGGCGAGGAGGTGCCGCAGGGCGGCACGGCCAAGTTCAGCCTGATCGCGGCCCAGCCGGACGGCAAGCGCACCGAACTCAAGGGCGCGCAGTGGTCGCTGCTCAAGGTCGAGCGGAACTACCAGTGGTATCGCTCGGGCAGTTCCTGGAATTATGAGCCGGTGACCTTCACCAAGTCGGTGGCATCCGGCCAGGTGGATCTTGCCGCCAATAACGAGGCGACCGTGTCGCTGCCGGTCGACTGGGGCCGCTACCGCCTCGAGGTCGAGACCGCAGACCCCGCCGGCCCGGCGACGAGCTACGAGTTCGATGCCGGCTGGTATGTCGCCGCGACTTCGACGGAAACGCCCGACGGCCTCGAAGTTGCGCTCGACAAGGAGGCCTATGCCGCAGGCGAAGTGGCCAAGCTCAAGGTCTCGCCGCGCTTCGCCGGCGAGCTTCTGGTGACCATCGGCGCAGAAAAGCTCTTGAAGACCGTCACCGCTTCGATCCCGGCCGATGGCGCCACCGTCGACATCCCGGTCGGCGATGACTGGGGCGCGGGCGCCTATGTGACGGCAACTCTCTACCGGCCAGGCGAGGCACAGGAATCGCGCATGCCGGCCCGCGCCATCGGCCTGAAATGGCTGGCGGTCGACCCTGCGGACAAGAAGCTGAACGTCGCGCTCACGCTTCCCGAGAAGACCGAGCCGCGCAAGGCGCTATCGATCCCGGTTGCGGTCACCGGGGCAAAGGCCGGCGACAAGGCCTATGTGATGGTCGCCGCCGTCGATGTCGGCATCCTCAACCTCACCAACTACCAGACGCCCGACCCCGAGGACTGGTATTTCGGCCAGCGCATGATGGGCCTTGAGATCCGCGACCTCTACGGCCGCCTGATCGATGGCTCTCTCGGCGCGATGGGCAGGCTGCGCACCGGCGGCGACGGCGCTGCCATGACCTCGCAAGGCAGCCCGCCCAAGGAAAAGCTGGTCGCCTTCTTCTCCGGCATCGTCGAACTCGACGCCGACGGCAAGACCACGGTCGACTTCGACATCCCGCAGTTCAACGGCACGGTGCGGGTGATGAGCGTTGCCTGGACGAAGGACGCGGTCGGCCATGCCGAGGGCGACGTGATCGTGCGCGATCCCATCGTGCTGACGGCCGGCATGCCGCGCTTCATGGCCCCCGGCGATTTCGCCGAAATGACGCTCGACATCGCCAACACCGATGCACCGGCCGGCGACTACACGCTGTCGGTCGACACGACAGGCGACCTGTCGACCGGCGACGCTGCCCTGCCGCAAAAGGTGACGCTCGAACCGGGCAAGCGGCAGACGCTCAAAATCCCGCTCATGCCGGTAGCTGCCGGCACGGCCGGCCTGACGGTGCGCCTCGCCAATGCAGAGGGGCTGAGCGTCGAGCAGGAGCTTTCGCTCCCCGTGCGGCCCGGGCAACTGCCGGTGACCACGCGTATGGTGGTGGACCTCAAGCCGAACGCCTCGCTGCGCATCGACAAGGAACTGCTGGCCGCGAGCCTGCTGCAGGACGCCCATGTCAGCGTCGGCGTGTCGCAATCCTCGGCCTTCGACGTGCCGTCGCTCCTGATGACGCTCGACCGCTATCCCTACGGCTGCGCCGAGCAGACGACGAGCCGGGCATTGCCGCTGCTCTATGTCAGCGAGCTGAGCGCCGACGCCGGCATGGCCGACGACCCGGAACTGCGCCAGCGCATCCAGGATGCCATCTACCGCGTGCTCAACTACCAGGCTTCGTCGGGCAGCTTCGGCCTGTGGGGGCCGGGCTCCGGCGACCTTTGGCTCGACGCCTATGTCTCCGATTTCCTGACGCGTGCGCGTGAAAAAGGCTTCGAGGTGCCGCAGCAGGCGATGATCCAGGCGCTCAACAACCTGCAGAACTCGATCGGCTACGACGTCGACGTCGAGGACCGCGGCTCGGAGATCGCCTATGCACTCTACGTGCTTGCACGCAACAAGAAGGCCTCCGTAGGTGACCTGCGCTATTTCGCCGACACCAAGCTCGAGGCCTTCACCAGCCCGATGGCGGTGGCACAGCTGGGCGCGAGCCTGGCGCTCTATGGCGACGCGCAACGCTCGGAGCAGGCATTTGAAGCAGCACTCCAGCTTGCCAAGGCGACCCCCGAGTTCGACTGGTACCGGTCGGACTACGGCTCGCGCCTGCGCGACGGCGCAGCCATGCTGGCGCTTGCGGCCGAAAGCAAGCCGGGTCGTGCCGGCGCTGATCAAGATGGTGGCGGCCGACCGCGCCGCGGCCAAGTGGACCAGCACCCAGGACGACGCCTGGATGCTGCTCGCAGCGCGCGCGCTCAAGGCCGGCAACGAGGCGATCTCGCTCGACATCGACGGCACCGCGCGCACCGGCTCCTACTCGCAGCGGATCGACGGTGCCGACCTTCTGGTCAACCCGGTGTCGATCGCCAACAAGGGCAAGAACCCGGTGCAGGCCGTGGTGACCACGGTCGCCGCCCCGGTCCAGCCCCTGCCCGCCGGCGGCGACGGTTTCACCATCGAGCGCACCTATTACCGGCTCGACGGCACCGAGGCCAATGTGACGGAGGTGAAGCAGAACGAGCGTTTCGTCGTCGTGCTCAAGATCAGCGAGCTCAACGACTGGCCCTCGCGCATCATCGTCGCCGACATGCTGCCCGCCGGCTTCGAGATCGACAATCCGGGGTTGGTGAACAGCGCCAACCTGTCGAACTTCCCGTGGCTTGCCCAGACCGAGGCCGCGCACCTCGAATTCCGCAACGACCGCTTCGTCGCCGCCATGGACAGCGGCGAAGGTGCGGACCAGGAATTCACGCTGGCCTATGTCGTCCGCGCTGTGACGCCGGGCGTCTATGCCCACCCGGCAGCCAATGTCGAGGACATGTACCGTCCGCAATATTCGGCGCGCACGGCCACCGGCATGATGGAGGTTAA
PROTEIN sequence
Length: 1815
MRAARVFPVFVLALLAWTLGAAAAENRRVVTSENGDYFGFDLRSEQNVTLDQCQTSCLGDSACRAFTYNTKAKWCFLKSDFATLKPFNGAVAGKVVPISGDPDIGAPAELSFFPASMVDEARQFRNGLVDNGIVNPDEGLASLTDAGETALQANDGRTAMQKFRAAAIILPDDVAIWTRLARAVQMTTPNDGNETASLQRDGTSSAYNAYLLSRTAANRAESLMLLARGLDKRDMFRPALQTYEASLALDNSASVRAEYEDLKARKGFRVVDHTIDADTTSPRVCAQFSEALVKAGVDYTPFVTVDDAAPKAVEAKDQQICVEGLEHGKHYRVTFRPGLPAAIGEVLTAPVVLSVYVQDRAQSARFTGDSFVLPSTARRGIPVVTVNMDAADMKLYRVGDRSLAQLLSGYQFLRQLDSYDLSSISDQMGEPVWEGQLVIANELNKEVTTSFPVDEALPNRKPGVYVLTAQPPDDRSDDWASKATQWFVVSDIGLSTYTGEDGLNVFARSLATAKPIADTELTLLARNNEILGTAKTDAEGRATFTPGLTRGDGGLAPAVLMASQGDSDFVFLDMTRAGFDLSDRGVTGRAAPGALDVYAWTERGIYRVGETVHSAALARDDAALASDLPLTFIFTRPDGVEDRRIVSQGGKSGGHAVDLPLSSAAMRGTWTLAIYTDPKQPAIASQMFLVEDFVPDRIEFDLTADRNEIAVGETAEATVDGRFLYGAPAAGLALEGEVTLATKREWDAFKGYYFGLADEQQGEATRIPLTDLPLVGDDGKATFPVEVGQVPSTTRLINAALTVRMRETGGRAVEERLDIGILPQGTMIGIRPDFSGEEVPQGGTAKFSLIAAQPDGKRTELKGAQWSLLKVERNYQWYRSGSSWNYEPVTFTKSVASGQVDLAANNEATVSLPVDWGRYRLEVETADPAGPATSYEFDAGWYVAATSTETPDGLEVALDKEAYAAGEVAKLKVSPRFAGELLVTIGAEKLLKTVTASIPADGATVDIPVGDDWGAGAYVTATLYRPGEAQESRMPARAIGLKWLAVDPADKKLNVALTLPEKTEPRKALSIPVAVTGAKAGDKAYVMVAAVDVGILNLTNYQTPDPEDWYFGQRMMGLEIRDLYGRLIDGSLGAMGRLRTGGDGAAMTSQGSPPKEKLVAFFSGIVELDADGKTTVDFDIPQFNGTVRVMSVAWTKDAVGHAEGDVIVRDPIVLTAGMPRFMAPGDFAEMTLDIANTDAPAGDYTLSVDTTGDLSTGDAALPQKVTLEPGKRQTLKIPLMPVAAGTAGLTVRLANAEGLSVEQELSLPVRPGQLPVTTRMVVDLKPNASLRIDKELLAASLLQDAHVSVGVSQSSAFDVPSLLMTLDRYPYGCAEQTTSRALPLLYVSELSADAGMADDPELRQRIQDAIYRVLNYQASSGSFGLWGPGSGDLWLDAYVSDFLTRAREKGFEVPQQAMIQALNNLQNSIGYDVDVEDRGSEIAYALYVLARNKKASVGDLRYFADTKLEAFTSPMAVAQLGASLALYGDAQRSEQAFEAALQLAKATPEFDWYRSDYGSRLRDGAAMLALAAESKPGRAGADQDGGGRPRRGQVDQHPGRRLDAARSARAQGRQRGDLARHRRHRAHRLLLAADRRCRPSGQPGVDRQQGQEPGAGRGDHGRRPGPAPARRRRRFHHRAHLLPARRHRGQCDGGEAERAFRRRAQDQRAQRLALAHHRRRHAARRLRDRQSGVGEQRQPVELPVACPDRGRAPRIPQRPLRRRHGQRRRCGPGIHAGLCRPRCDAGRLCPPGSQCRGHVPSAIFGAHGHRHDGG*