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cn_combo_scaffold_4949_12

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 9615..11072

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E7B69 similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 483.0
  • Bit_score: 917
  • Evalue 6.50e-264
nitrogen assimilation regulatory protein ntrC similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 486.0
  • Bit_score: 892
  • Evalue 6.30e-257
Nitrogen assimilation regulatory protein NtrC {ECO:0000313|EMBL:BAB47987.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 486.0
  • Bit_score: 892
  • Evalue 3.10e-256

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAGCGCGCGCGGGAACATTCTGGTCGCGGACGACGACGCGGCCATCCGTACGGTGCTCAACCAGGCGCTCTCGCGCATGGGCCACGACGTGCGCGTGACCTCGAACGCGGCAACCCTCTGGCGCTGGGTCGCGGCGGGCGAGGGCGACCTGGTCATCACAGATGTGGTGATGCCCGACGAGAACGCCTTCGACATGCTGCCGCGCATCAAGAAGGCACGGCCTGAGTTGCCGGTCATCGTCATGAGCGCCCAGAACACCTTCATGACCGCCATCCGCGCGTCGGAAACCGGCGCCTACGAGTATCTTCCCAAGCCGTTCGACCTGACCGAACTGCTCAGCATCGTCAACCGCGCCCTGGCCGAGCCGCGGCGTCCCAAGGTCGATCACCGGCATGACGACCAGCCCGATTCCATGCCGCTGGTGGGGCGCTCGGCTGCGATGCAGGACATCTACCGCATGCTGGCGCGCATGATGCAGACCGACCTCACGGTGATGATCACCGGCGAATCGGGCACCGGCAAGGAACTGGTGGCGCGGGCGCTCCATGAATACGGACGCCGCCGCAATGGACCCTTCGTGGCGATCAACATGGCGGCGATCCCGCGCGACCTCATAGAATCCGAGCTGTTCGGCCACGAGAAGGGGGCGTTCACCGGGGCGCAGAACCGCTCGACCGGCCGCTTCGAGCAGGCCGAAGGCGGCACGCTTTTCCTTGACGAGATCGGCGACATGCCGATGGAGGCACAGACGCGCCTGCTGCGCGTGCTGCAGCAGGGCGAATACACCACCGTCGGCGGTCGCACCCCCATCAAGACCGACGTTCGCATCGTGGCCGCTACGAACAAGGATCTGCGCGCGCTCATCAGCCAGGGCCTGTTCCGCGAGGACCTCTTCTACCGTCTCAACGTTGTGCCTTTGCGCCTGCCTGCGCTGCGCGAAAGAGCCGAGGATATTCCTGACCTTGTGCGCCACTTCTTCAAGCAGGGCGTGAACGAGGGTTTGCAGACCAAGCGCATTTCGGCAGGCGGCATCGAACTGATGAAGCGCTATCCGTGGCCGGGCAATGTGCGCGAGCTCGAGAACCTCGTGCGCAGGCTGGCGGCGCTCTATCCGCAGGACGAAATCTCTGCCGAAATCATCGAAGGCGAGCTCAAGACCGGCGAGCAGCAGGTGGTACCGGGCGGCAATCTCATTCCCGACGATCTTTCCGTGGGGCAGGCCGTGGAGCACTTCCTGCAGCGGTATTTCGCGATGTTTGCCGGCGAACTACCACCGCCGGGTCTCTATCAGCGCATTCTTGCAGAGGTCGAGTATCCGCTCGTGCTGGCGTCGATGACAGCCACTCGCGGCAACCAGATTAAGGCGGCGGAGCTACTGGGGCTGAACCGCAATACGCTGCGCAAGAAGATCCGCGAACTGGGCGTCAACGTCTATAAGGCGTCCCGCGCGGGCTAA
PROTEIN sequence
Length: 486
MSARGNILVADDDAAIRTVLNQALSRMGHDVRVTSNAATLWRWVAAGEGDLVITDVVMPDENAFDMLPRIKKARPELPVIVMSAQNTFMTAIRASETGAYEYLPKPFDLTELLSIVNRALAEPRRPKVDHRHDDQPDSMPLVGRSAAMQDIYRMLARMMQTDLTVMITGESGTGKELVARALHEYGRRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAATNKDLRALISQGLFREDLFYRLNVVPLRLPALRERAEDIPDLVRHFFKQGVNEGLQTKRISAGGIELMKRYPWPGNVRELENLVRRLAALYPQDEISAEIIEGELKTGEQQVVPGGNLIPDDLSVGQAVEHFLQRYFAMFAGELPPPGLYQRILAEVEYPLVLASMTATRGNQIKAAELLGLNRNTLRKKIRELGVNVYKASRAG*