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cn_combo_scaffold_5539_1

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1..918

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003821D49 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 305.0
  • Bit_score: 552
  • Evalue 2.70e-154
LacI family transcriptional regulator {ECO:0000313|EMBL:EXL10507.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquam similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 305.0
  • Bit_score: 460
  • Evalue 1.90e-126
transcriptional repressor, LacI family similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 302.0
  • Bit_score: 436
  • Evalue 4.60e-120

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
CCGACGCTCAGCCGCATCCGCGAGGTGGCGCGCGAGATGAACTACCGGCCCAATGTCAGCGCCCGCAATCTGCGCACGCAGAAGGCAATGGCCGTGCTCATGGTCGTCCGCGACGTCGGCAACCCGTTCTATCTCGAAATCCTCAAGGGCGTCGAAGCCACCGCCCGCGCGGCCGGCTATTCGGTGCTCATGGGCAATACCGAAAACGACTCCGACCGCGAGGTCGAGTATTTCGACATGCTGCGCGACGGCCATGCCGACGGCATGATCCTGATGACCGGCAAGCTGCCCCAGCGCGACGGCTTCGTCGCCTCGATGGCGCGGGGCGCGCCGATCGTCGTGGCGCTGGAGGAGATCCAGAACGCCGGTTTCCCGCATGTCATGGTCGACAACGAAGGCGCGGCACGCCACGCCGTCGAACACCTGATCGGGCTCGGCCACCGGCGCATCGCCCATATCTCGGGGCCTGTGCCGGAGCTGATGAGCATCAACCGCCGCGACGGCTACCGCAGGGCAATGGCCGCGGCCAACCTGCCTATTCCTGCCGGCTACGAGCAGGCCGGCGATTACCTGCTGCACACCGGCCAGCGGCTCTGCCGGGCGCTGTTCGAGCTGCCCGAGCCGCCGACCGCCATCTTCGTCGCCAACGACGAAATGGCTTTTGGCGTGATCCACGAACTGCGCAAGCTGGGCATCGACGTGCCCGGCCAGGTTTCGGTCGTCGGTTTCGACGACCTGTTCCTCAGCGAGGCCTTCTACCCGCCGCTGACCACAGTCAGCCAGCCACGCACCGACATCGGCCGCGCCGCAATGTCCATGCTGCTCGACCTGCTATCGGGCGGCCCGGCGCCGCGCCTGCCGGTGATGATGCCGACGACCCTCAAGGTGCGCGGCACCACCGCGCCCGCACCGAAATGA
PROTEIN sequence
Length: 306
PTLSRIREVAREMNYRPNVSARNLRTQKAMAVLMVVRDVGNPFYLEILKGVEATARAAGYSVLMGNTENDSDREVEYFDMLRDGHADGMILMTGKLPQRDGFVASMARGAPIVVALEEIQNAGFPHVMVDNEGAARHAVEHLIGLGHRRIAHISGPVPELMSINRRDGYRRAMAAANLPIPAGYEQAGDYLLHTGQRLCRALFELPEPPTAIFVANDEMAFGVIHELRKLGIDVPGQVSVVGFDDLFLSEAFYPPLTTVSQPRTDIGRAAMSMLLDLLSGGPAPRLPVMMPTTLKVRGTTAPAPK*