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cn_combo_scaffold_5835_4

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2911..3450

Top 3 Functional Annotations

Value Algorithm Source
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 175.0
  • Bit_score: 257
  • Evalue 2.20e-66
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HYM2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 174.0
  • Bit_score: 267
  • Evalue 7.70e-69
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EHK54178.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 174.0
  • Bit_score: 266
  • Evalue 3.10e-68

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGCGGTTCGTCGAGACTGAATTGAGCGGAGCCTGGATCGTCGAGCCGGAACCGGTGGGTGACGAGCGCGGCAGCTTCATGCGTACCTTCTGCGAGAACGAGTTCACTGCGGCGGGGTTGGAGACGCGTTTTGTCCAGCACAGCCAGTCGCACTCCGCGCAAAAGGGCACGTTGCGCGGCATGCATTTCCAGCTGCCGCCGCACGGCGAGGTGAAGCTGGTGTCCTGCATCCGGGGCGCGATCTGCGACGTCATCATCGACATGCGGCCGTCCTCGCCAACCCGGCATCAATGGATCGCGGTGGAGCTCAGCCCGGAGAACCGCCGCCAGCTCTATGTGCCGGTGGGGTTCGCGCACGGATTCCAGACGCTCACGGACGACGCCGTGGTGTCCTACCTGATCTCGCAGTTCTATGTGCCGCAGGCTTCGGTCGGGGTTCGGTTCGACGATCCGGCGTTCGCAATCAAGTGGCCGCTCGCGCCTGGCACAATGTCAGAACGGGACCGCGCCTGGCCGTTGCTGGAAGCGGCCGACTTATGA
PROTEIN sequence
Length: 180
VRFVETELSGAWIVEPEPVGDERGSFMRTFCENEFTAAGLETRFVQHSQSHSAQKGTLRGMHFQLPPHGEVKLVSCIRGAICDVIIDMRPSSPTRHQWIAVELSPENRRQLYVPVGFAHGFQTLTDDAVVSYLISQFYVPQASVGVRFDDPAFAIKWPLAPGTMSERDRAWPLLEAADL*