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cn_combo_scaffold_7866_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2646..4883)

Top 3 Functional Annotations

Value Algorithm Source
GTP pyrophosphokinase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003609984 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 745.0
  • Bit_score: 1400
  • Evalue 0.0
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:ETA72137.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 745.0
  • Bit_score: 1327
  • Evalue 0.0
GTP pyrophosphokinase similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 745.0
  • Bit_score: 1327
  • Evalue 0.0

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2238
ATGATGCGTCAGTATGAGCTTGTCGAGCGCGTTCAGCGCTACAAGCCTGACGTCAACGAGGGGCTTCTCAACAAGGCCTATGTCTATGCCATGCAGAAGCATGGCCACCAGCGCCGGGCTTCGGGCGATCCCTATTTCTCGCATCCGCTGGAAGTCGCGGCGATCCTCACCGACATGCATCTCGACGAGGCGACGATCGCGGTTGCCCTGCTGCACGACACGATCGAGGACACCTCGGCCACGCGCGACGAGATCGACGAGTTGTTCGGGCCCGACATCGGCAAGCTGGTCGAGGGGCTGACAAAGCTCAAGAAGCTCGACCTCGTCTCCAAGAAGGCCGAGCAGGCGGAAAACCTGCGCAAGCTGCTCTTGGCGATCTCGGAAGACGTTCGCGTGCTGCTGGTCAAGCTTGCGGACCGTCTCCACAACATGCGCACGCTGCATCACGTGCCGGAAGGCAAGCGGCTGCGCATCGCCGAGGAGACGATGGACATCTATGCGCCGCTTGCCGGCCGCATGGGCATGCAGGGAATGCGCGAAGAGCTCGAGGAACTCGCCTTCCGCTACATCAACCCCGAAGCCTACCGGACGGTCACCGAGCGGCTGAAGGACCTTTTCGAGCGCAACAAGGGCGTGCTCGTCGACATCGAGAAGTCGCTGTCGCAGCTGTTCGAGAAATACGCGATCAAGGCGACGGTCACGAGCCGGCAGAAGAAGCCGTGGTCGGTGTTCCGCAAGATGGAGACCAAGGCGCTCTCGTTCGAGCAGCTGTCGGATATCTTCGGCTTCCGCGTCATCGTCGACAGCCTGGAGGATTGCTATCGGGCGCTGGGCGCCATCCATACGACCTGGTCGATGGTTCCGGGGCGCTTCAAGGACTACATCTCGACGCCCAAGCAGAACGATTACCGCTCGATCCACACCACCATCGTGGGGCCCTCGCGCCAGCGCATCGAGCTGCAGATCCGCACTCGCGAGATGAACACGGTCGCTGAATACGGCGTGGCGGCGCACTCGATCTACAAGGACAGCGTGGCGAAGCTCAACGGCGCCGGCCACCAGATCTCCAAGGACACCAACGCCTATGGCTGGCTGCGGCGGACCATCGAGCAGCTGGCGGAAGGCGACAGCCCCGAGGATTTCCTCGAGAATACCAAGCTGGAGCTGTTCCAGGACCAGGTGTTCTGCTTCACGCCCAAGGGCATGCTGATCGCGCTGCCGCGCGGCGCGACCCCCATCGACTTCGCCTATGCCGTGCACACCGACGTCGGCGACACATGCGTGGGCGCCAAGGTCAACGGCCGCGTCATGCCGCTGATGACCGAGCTCAAGAACGGCGACGAGGTCGAGATCATCCGCTCCAAGGCGCAGGTGCCGCCGGCCGCCTGGGAGGCCATCGTTGTCACCGGCAAGGCGCGCGCGGCGATCCGGCGCGCCACCAAGAACGCCATCCGCAAGCAATATTCGGGGCTCGGCACGCGAATCCTGGAACGCGCCTTCGAGCGCGCCGAAAAGAAATTCTCCAAGGAGAGCCTGAAGCCGGTGCTGCATCGCCTGGCGCGCAAGGACATCGAGGACGTGCTGGCGGCGGTCGGTCGTGGCGAACTGTCCTCCAACGACGTGGTGCGCGCGGTATTCCCCGACTACAAGGAAGAGCGTGCCACGCCCACGACGCCCAAGCAGCGCGAGGAGGGCTGGTCGAAGATCCGCAACGCCGCCGGCATGCTGTTCCAGATACCGGGCAGGGGCTCGACGCCGGCGCAGCGCAAGGAGTCCAAGCGCTGGGGGCCGGCGGTGCCGATCCGCGGCGTCAGCGGCGACCTGCCGGTGAAGTTCGCACCGGAAGGGGCGGTGCCGGGCGACCGCATCGTCGGCATCATGCAGCCGGGATCGGGCATCACCATCTATCCGATCCAGTCGCCCTCGCTGATGGCCTTCGACGACCAGCCGGAGCGCTGGATCGACGTGCGCTGGGATCTCGACGAGGACTCGAAGGAGCGTTTCCCGGCGCGCATCACGGTCACTGCGATCAATGCGCCGGGTTCGCTCGCCGACATCGCCCAGGTGGTGGCGGCCAACGACGCCAACATCCACTCGCTGTCGATGGTGCGCACCGCGCCCGACTTCACCGAAATGCTCATCGACCTCGAGGTCTGGGACCTCAAGCACTTGAACCGGCTGATCTCCCAGCTCAAGGAAAACAGCAGCGTCAGCGACGCCCGCCGCGTCAACGGCTGA
PROTEIN sequence
Length: 746
MMRQYELVERVQRYKPDVNEGLLNKAYVYAMQKHGHQRRASGDPYFSHPLEVAAILTDMHLDEATIAVALLHDTIEDTSATRDEIDELFGPDIGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLHHVPEGKRLRIAEETMDIYAPLAGRMGMQGMREELEELAFRYINPEAYRTVTERLKDLFERNKGVLVDIEKSLSQLFEKYAIKATVTSRQKKPWSVFRKMETKALSFEQLSDIFGFRVIVDSLEDCYRALGAIHTTWSMVPGRFKDYISTPKQNDYRSIHTTIVGPSRQRIELQIRTREMNTVAEYGVAAHSIYKDSVAKLNGAGHQISKDTNAYGWLRRTIEQLAEGDSPEDFLENTKLELFQDQVFCFTPKGMLIALPRGATPIDFAYAVHTDVGDTCVGAKVNGRVMPLMTELKNGDEVEIIRSKAQVPPAAWEAIVVTGKARAAIRRATKNAIRKQYSGLGTRILERAFERAEKKFSKESLKPVLHRLARKDIEDVLAAVGRGELSSNDVVRAVFPDYKEERATPTTPKQREEGWSKIRNAAGMLFQIPGRGSTPAQRKESKRWGPAVPIRGVSGDLPVKFAPEGAVPGDRIVGIMQPGSGITIYPIQSPSLMAFDDQPERWIDVRWDLDEDSKERFPARITVTAINAPGSLADIAQVVAANDANIHSLSMVRTAPDFTEMLIDLEVWDLKHLNRLISQLKENSSVSDARRVNG*