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This organism can only be binned in the context of its binning project CG10_big_fil_rev_8_21_14_0_10. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

cn_combo_scaffold_8728_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(4563..5219)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378C1C3 similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 212.0
  • Bit_score: 346
  • Evalue 1.60e-92
Regulatory protein TetR {ECO:0000313|EMBL:CDX40934.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 207.0
  • Bit_score: 292
  • Evalue 6.50e-76
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 207.0
  • Bit_score: 286
  • Evalue 7.10e-75

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
TTGAGCGCCGGCGAACGCCGGAAATTCCGCCGCGAGGGCGAAGAGCGCCGGCGGCAGGATTTGATCGATGCCACGCTCGACTGCATTGCCGATCATGGCCTTCAGGGCGCGACCGTGCGGGCGATCGCCCTTCGCGCCGGCGTCACCGCCGGCCTTATCCGCCACTATTTCCCAGGCAAGGAAGACCTCCTGCAGGCGGCATATGCAAACGTCATGGGACGAATGACCGAACTCGCCAAGACCGCGCTTGCGACGGTGGACGAGGAGCCGAGACTGCGCCTCGCGGCCTTCGTCGAGGCCAGCCTGGTGCCGCCAGTGGTCGATGCGCGCTCCTTCTCGCTCTGGGCGAGCTTCATCGGCCGGGCAAGCTCCGACGCGGCATTGGGCGCGGCCCACCGTGCCGGCTATCTCGGCTTTCGCGACGAGGTCGAGGCACTGGTCGCCGAGGTTCTGGCCGGCGCCGGCCGCCCGGCGGGCATAGCCGAGCTGCGGCGGCAGGCCATCGCCATCAACGCTGTCATCGACGGGCTTTGGCTCGAAGGCTGCCTGGCGAGCGAGATGTTTTCGACCGGCGAGCTGGCGGAGATCGGCATCGGCTCGGTGGAGGCGATGCTGGGAGTGAAGCTCAGGGACGAAACAGAGGTGGAGCGGGCATGA
PROTEIN sequence
Length: 219
LSAGERRKFRREGEERRRQDLIDATLDCIADHGLQGATVRAIALRAGVTAGLIRHYFPGKEDLLQAAYANVMGRMTELAKTALATVDEEPRLRLAAFVEASLVPPVVDARSFSLWASFIGRASSDAALGAAHRAGYLGFRDEVEALVAEVLAGAGRPAGIAELRRQAIAINAVIDGLWLEGCLASEMFSTGELAEIGIGSVEAMLGVKLRDETEVERA*