ggKbase home page

cn_combo_scaffold_403

Alias: MIC18_4

Search features with annotation key words

Displaying items 61-80 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_403_60
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66482..67405)
DNA (924bp) protein (308aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1348253 species="
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003642AA1
fmt; methionyl-tRNA formyltransferase
cn_combo_scaffold_403_61
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67414..69396)
DNA (1983bp) protein (661aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=273677 species="Ba
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FDDB0
primosomal protein N' (replication factor Y) - superfamily II helicase
cn_combo_scaffold_403_62
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69428..70621)
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Microbacterium RepID=UPI00037E04F4
metK; S-adenosylmethionine synthetase
cn_combo_scaffold_403_63
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70726..70980)
DNA (255bp) protein (85aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium yannicii RepID=UPI0002F5285A
rpoZ; DNA-directed RNA polymerase, subunit K/omega
cn_combo_scaffold_403_64
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71071..71646)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036CFCD8
CoA-binding protein {ECO:0000313|EMBL:KDA06298.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
CoA-binding protein
cn_combo_scaffold_403_65
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71643..72962)
DNA (1320bp) protein (440aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:EZP29755.1}; EC=2.5.1.49 {ECO:0000313|EMBL:EZP29755.1};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteria
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49) rbh
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003828E6D
cn_combo_scaffold_403_66
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73000..75033)
DNA (2034bp) protein (678aa)
acetyl-CoA synthetase n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003611603
Acetate/CoA ligase {ECO:0000313|EMBL:CDK00928.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
acetate/CoA ligase rbh
cn_combo_scaffold_403_67
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75035..75865)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K189_9MICO
Alkanesulfonate transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDK00929.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
binding-protein-dependent transport system inner membrane protein
cn_combo_scaffold_403_68
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75862..76905)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037D788B
Aliphatic sulfonates family ABC transporter,periplasmic ligand-binding protein {ECO:0000313|EMBL:CDK00930.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microba
aliphatic sulfonate ABC transporter substrate-binding protein
cn_combo_scaffold_403_69
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76902..77753)
DNA (852bp) protein (284aa)
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:KJQ54923.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ54923.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriace
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFK7_9MICO
ABC transporter
cn_combo_scaffold_403_70
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77807..78703)
DNA (897bp) protein (299aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
guanylate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003480804
gmk; guanylate kinase
cn_combo_scaffold_403_71
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78696..79586)
DNA (891bp) protein (297aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032220};; TaxID=400772 species="
Orotidine 5'-phosphate decarboxylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIK7_9MICO
orotidine-5'-phosphate decarboxylase
cn_combo_scaffold_403_72
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79583..82870)
DNA (3288bp) protein (1096aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
carbamoyl phosphate synthase large subunit n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DCAD6
carB; carbamoylphosphate synthase large subunit
cn_combo_scaffold_403_73
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82870..84024)
DNA (1155bp) protein (385aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFM1_MICTS
carA; carbamoylphosphate synthase small subunit
cn_combo_scaffold_403_74
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84021..84530)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000307F404
Uncharacterized protein {ECO:0000313|EMBL:KEP74385.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
cn_combo_scaffold_403_75
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84527..85861)
DNA (1335bp) protein (445aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1504156 species="
dihydroorotase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C1C11
pyrC; dihydroorotase
cn_combo_scaffold_403_76
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85858..86838)
DNA (981bp) protein (327aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1451261 species="Ba
aspartate carbamoyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002FCF0F3
pyrB; aspartate carbamoyltransferase, catalytic chain
cn_combo_scaffold_403_77
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86835..87365)
DNA (531bp) protein (177aa)
Bifunctional protein PyrR n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL7_MICTS
pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strai
cn_combo_scaffold_403_78
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87430..88986)
DNA (1557bp) protein (519aa)
Predicted Zn-dependent hydrolase of the beta-lactamase fold n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL4_MICTS
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KEP74380.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Zn-dependent hydrolase of the beta-lactamase fold
cn_combo_scaffold_403_79
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89063..91981)
DNA (2919bp) protein (973aa)
Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL2_MICTS
Superfamily II DNA/RNA helicase, SNF2 family {ECO:0000313|EMBL:BAJ76494.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium t
superfamily II DNA/RNA helicase, SNF2 family
Displaying items 61-80 of 80 in total

View Taxonomy