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cn_combo_scaffold_1361_19

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 24716..25723

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FU66_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 330.0
  • Bit_score: 302
  • Evalue 6.90e-79
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 330.0
  • Bit_score: 300
  • Evalue 5.60e-79
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEG43262.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabi similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 330.0
  • Bit_score: 300
  • Evalue 2.80e-78

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
GTGGTGACCGTTCACGACGTCGCAGCCCGCTCCGGGGTGTCCATCGCGACGGTGTCGCGCACGCTGCGGGTGCCGCACCGCGTCTCTGGCGACACGCGTGACCGCGTCCTCGCCGCGATCGAGGAGCTCGGCTATCGGCCCAACCGCGCCGCGGCGAGCCTGCGTCGCGGGCGCACCGGCGTGATCGCGTTCGTCGTGCCCGACATCGAGAACCCCTACTTCGCGTCGCTGACCAAGGGGGCGCAGGCCGCGTCCCGCGCTCGCGGGTACGGGCTGGTCGTCGTCGACACGACCGAGTCCGCCGAGGTGGAGTCCGAGGAGATCCGGGCGCTGCGCTCGCAGATCGATGGCATCATCCTGGTCTCGTCGCGGCTCCCCGACGAGCAGCTTCTGGAGGTTGCGGAGGGGGCGGTCAGCGTGCTGATCAACCGCGACCTCGGCGACCGGTCGCCGGCCACTCCTTCGGTGGCGATCGACGAGGCGGCCGCGTCCGACGCGGCGGTGGCCCACCTCGCCGAGCTCGGACATCGACGCCTCGCCTACGTGGGCGGACCGGCGCACTCGTGGTCGCAGGAGCGTCGCGCGCGCGGCGTCCGCGACGCCGTCGCGGCCCGGCCCGGCCTCACTCTCGCAGAGCTCGCCGATGTCGTCCCCACCGCCGCGGGCGGTCGCGCCGTCGCCGACGCCGTGCTCGGGGGCGGTGTCACCGCGGTGCTCGCGTACAACGACCTCGTGGCCCTGGGGCTCCTCGCGGAGTGGGGGGAGCGCGGCGTGCGTGTTCCCGAAGACATCAGCCTCGTCGGCTTCGACAACACTTTCGTGGCTGAGCTTTCGTCCCCGCTCCTCACGAGCGTCGGCACCGACCTTCGCGATGCCGGGGAGGCGGCCGTCGAGCTGCTCCTGCAGCGGGTCGAGGCCACGGATTCGGACGCCCCGGCAGCGTATCGGACGCTGCGTCCGGAACTGGTCGTGCGCGCGTCGACGGCACCCGTTCGCACGGCGGATTGA
PROTEIN sequence
Length: 336
VVTVHDVAARSGVSIATVSRTLRVPHRVSGDTRDRVLAAIEELGYRPNRAAASLRRGRTGVIAFVVPDIENPYFASLTKGAQAASRARGYGLVVVDTTESAEVESEEIRALRSQIDGIILVSSRLPDEQLLEVAEGAVSVLINRDLGDRSPATPSVAIDEAAASDAAVAHLAELGHRRLAYVGGPAHSWSQERRARGVRDAVAARPGLTLAELADVVPTAAGGRAVADAVLGGGVTAVLAYNDLVALGLLAEWGERGVRVPEDISLVGFDNTFVAELSSPLLTSVGTDLRDAGEAAVELLLQRVEATDSDAPAAYRTLRPELVVRASTAPVRTAD*