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cn_combo_scaffold_1623_13

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(12412..13743)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000318B225 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 437.0
  • Bit_score: 526
  • Evalue 3.00e-146
LytR family transcriptional regulator {ECO:0000313|EMBL:EXJ51357.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 440.0
  • Bit_score: 503
  • Evalue 2.20e-139
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 436.0
  • Bit_score: 386
  • Evalue 7.90e-105

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
GTGACCGGCGCGCATCAGCCGGCGCCCCGCGCGGGGCGCGAGACCGTCGCACGGCATGCCCGTGAGACGCGGCATCCGCTCATCCGTGCCCTGTCGGTGGTGGGCGTCGTGGTCGCCGTGCTCGCCACGAGCATCGCCGGCGTCGCCGCGTACACCGTGTGGGACACCGTCTCCGCCCTCGAGGACTCGTCCGTCGAGCTCGTCGGGAACGAGGTGCTCCCGCCGTCGATCGGCGAGATCGAGGGTGGGGTCAACGTCCTCCTGGTCGGATCGGATTCGTGCGAGGGGCAGGACATCTCGCTCTTCCCGCGCTGCGCGAACAAAGACGCCGAGGGCGAGCGCAACGACGTCACGATGCTCGTGCACATCTCCGACGAGCCGCGGCGGGTGACCGTCGTGTCGTTCCCGCGCGACATGATCGTGCCGATCCCCTCCTGCCCGGACGGCGAGGGTGGGCAGTACTCGGCGATGTCGGCGCAGCCGCTGAACGCCTCGTACATGTACGGCGGTCTTCCGTGCACGGCGCTGATGATCGAGGAGCTCACCGGCGAGGAGATCCACTTCGCCGCCGCGATCCGCTGGACGGGCGTCATCGACATGTCCGACGCGATCGGCGGCGTCGACGTGTGCGTCGCCGGTGACATCTCCGACGTCCACACCGGCCTGTCGCTCACCGAGGGTGAGCACACACTGCAGGGCGTGGAGGCGCTGCAGTTCCTTCGCATCCGTCATGGCATCGGCGACGGGTCCGATCTCGGGCGCATCTCCAATCAGCAGCAGTTCATGTCGTCGATGGTGCGCAAGCTGAAATCGGATGCCGTCCTCGGCGACCCGCAGACGCTCCTCCGTTTCGCCACCACCGCGGTCGATCTGACGCGTCAGGATCCGCCGCAGCTCGTGCTGAGCTCGGATCTGGCGAACCCGATGCGCATGGTGCAGATCGCCATGGCCGCCAAGGACGTGCCGTTCGAGGACATCGTCTTCGTGCAGTACCCCACCGAGTACGACGCCGACTTCGTCCACGTCCTCCCGGTGCGGGACGCCGCGGACGTGCTGTTCGCCGCGCTGCGCGAGAACCAGGCCGTCACCCTGACGGGTGAGGCCAGCCAGGGCTACGGCGTCGAGGTGCGCGGCGAGGTCGAGGGAGGCGAGACCGCGGAGCCGGCGCCTGAGGGTGAGGGCGACGCAGCGGCGGGCGAGACGGATGCCGCACCCGAGGCGGAGGGCGAGACCGGTGGTGAGGCCGTCGCCCCGATTGAGCGCGTCGAGCTGCCCTCCCAGATCGCCGGCACCACGGCTGCCGAGGTCACCTGCACGCGCCCCGAGTCCTGA
PROTEIN sequence
Length: 444
VTGAHQPAPRAGRETVARHARETRHPLIRALSVVGVVVAVLATSIAGVAAYTVWDTVSALEDSSVELVGNEVLPPSIGEIEGGVNVLLVGSDSCEGQDISLFPRCANKDAEGERNDVTMLVHISDEPRRVTVVSFPRDMIVPIPSCPDGEGGQYSAMSAQPLNASYMYGGLPCTALMIEELTGEEIHFAAAIRWTGVIDMSDAIGGVDVCVAGDISDVHTGLSLTEGEHTLQGVEALQFLRIRHGIGDGSDLGRISNQQQFMSSMVRKLKSDAVLGDPQTLLRFATTAVDLTRQDPPQLVLSSDLANPMRMVQIAMAAKDVPFEDIVFVQYPTEYDADFVHVLPVRDAADVLFAALRENQAVTLTGEASQGYGVEVRGEVEGGETAEPAPEGEGDAAAGETDAAPEAEGETGGEAVAPIERVELPSQIAGTTAAEVTCTRPES*