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cn_combo_scaffold_1741_19

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 13557..18329

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DEAD/DEAH box helicase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F1CCA similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 999.99
  • Bit_score: 2552
  • Evalue 0.0
Lhr-like helicase {ECO:0000313|EMBL:BAJ73965.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).; similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 999.99
  • Bit_score: 2453
  • Evalue 0.0
Lhr-like helicase similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 999.99
  • Bit_score: 2453
  • Evalue 0.0

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4773
ATGAGCGACGTGCTCGAGCGGTTCGGTCCCGCGACCCGGGACTGGTTCCGTGGCGCCTTCGCGGCGCCGACCACCGCGCAGGCGGGGGCGTGGGAGGCGATCTCGGCCGGACGCCACGCGCTGGTGGTCGCCCCGACGGGCTCGGGGAAGACCCTCTCGGCGTTCCTCTGGGCGATCGACCGGGTGTTCCGCGAGAAGCCGATCCCGCCGCCCGAAGAAGCCACCGGCCGGAAGAAGCGCCCACGGCCAGACGACACCCCCGCCACCCGCGTCCTCTACATCTCGCCGCTGAAGGCCCTCGGCGTCGACGTCGAGCGCAACCTCCGCTCCCCGCTCGTCGGCATCGAGCAGTCCGCGCGGCGCCACGGCATCGCGGTCCCCCCGGTACGGGTAGGGGTGCGCTCGGGCGACACTCCGGCGTCCGAGCGGCGGTCGCTCGTGCAGGATCCGCCCGACATCCTCATCACCACCCCCGAGTCGCTGTACCTCATGCTCACCAGCGCCGCGGGCGAGACCTTGCGCGGGGTCCACACGGTCATCGTTGACGAGGTTCACGCGGTGGCCGCCACCAAGCGCGGCGCCCACCTCGCCGTGAGCCTCGAGCGCCTCGACGCCCTGCTCGACGCCCCCGCGCAGCGGATCGGCCTGTCGGCGACGGTGCGTCCGATCGACGAGGTCGCGCGCTTCCTCGGCGGAGCCGCGCCCGTCGAGATCGTCGCGCCCCGCGCCTCCAAGGCGTTCGACATGAAGGTCGTCGTCCCCGTCGACGACATGCTGAACCCGCCTCCTGCCCCCGGCTCGAACCCGCCCCCGACCGCGAAGACCGCCGATACGGATGCCGCACCCATCGACGAGGACTGGTTCGGCGACGGCTCCACGGCCTCGCCGACGACCGAGATCACAGGCTCCGTCTGGCCGCACGTGGAGGAGGCGATCGTCGACCGGATCCTCCACCAGCGGTCGACGATCGTCTTCTGCAACTCCCGCCGTCTCGCCGAGCGCCTCACCGGGCGCCTGAACGAGATCTACGCCGAGCGCCTGGGTCTCGACCTGCCCGATCCGACCGTCCCGGCGCAGATGATGGCGCAGGCCGGCGCGACCTCGGGGGCTGACCCCGTCCTCGCCAAGGCGCATCACGGCTCGGTGTCGAAGGAGCAGCGGGCGATCGTCGAGGACGAGCTGAAGTCCGGCGTGCTCCGCTGCGTGGTCGCCACCTCGAGCCTCGAACTCGGCATCGACATGGGTGCGGTCGACCTCGTCATCCAGGTCGAGGCACCGCCGAGTGCGGCATCCGGACTCCAGCGCATCGGCCGCGCCGGCCACCAGGTGGGCGAGGTGAGCCGCGCCGCCCTCTTCCCCAAGCACCGCAGCGACGTGCTGCACACCGCGATCGTGACCGAGCGGATGCTGGCGGGGAAGATCGAGGCGATCGCCGTTCCGCAGAATCCGCTCGACATCCTCGCCCAGCAGACCGTGGCGGCGTGCGCGCTGGCGCCGCTCGAGGTGGAGACGTGGTTCGAGACGCTCAAGCGCAGCGCCCCGTTCCGCGCCCTCCCCCGCTCGGCTTACGAGGCGACCCTCGATCTGCTCGCCGGCCGGTTCCCCTCGGACGAGTTCGCCGAGCTCCGCCCGCGCCTCATCTGGGACCGCGATCACGGCACCCTCACCGCGCGTCCGGGCGCGCAGCGCCTCGCGGTCACGAGCGGCGGAACGATCCCCGACCGGGGGCTGTTCGGCGTCTTCATCGCGGGCGAGTCGCAGAACGCCCGCGTCGGCGAGCTCGATGAGGAGATGGTCTACGAATCGCGCGTCAACGATGTCTTCACGCTCGGCACGACCAGCTGGCGGATCGTGGAGATCACCCACGATCGCGTCAACGTCCTCCCCGCCTTCGGGCAGCCCGGCAAGGTCCCGTTCTGGCACGGCGACGGCATCGGCCGCCCCGCCGAGCTCGGCGAGGCCCTCGGGAAGTTCTCGCGCGAGGTGTCTGCCGCGGGTCCCGAGAAGGCACACGAGCGCCTCATCGAGGCCGGTCTCGACGACTACGCCCGCGCGAATCTCCTCGCCTACCTCGACGAGCAGCGCGAGGCCACCGGCACCCTCCCGACCGACCGCCAGCTGACGGTCGAGCGCGGCCGCGACGAGGTCGGCGACTGGCGCGTGATCCTGCATTCCCCGTACGGCATGCAAGTGCACGCTCCGTGGGCTCTGGCCGTCAACGCCCGCATCCGCGAACGCCTCGGTGTCGAGGGGTCCGCGGTCGCGAGCGACGACGGCATCATCGCCCGGATCCCGGATGCCGAGGCCGAACCTCCCGGCGCCGAACTCTTCGTCTTCGACCCCGATGAGCTGGAGCAGATCGTCACGGCCGAGGTCGGCGGCTCCGCCCTCTTCGCGGCCCGCTTCCGTGAGTGCGCCGCGCGGGCCCTTCTGATGCCGCGACGGAATCCCGGCAAGCGCACCCCGCTCTGGCAGCAGCGCCAGCGCTCGGCGCAGCTGCTCGAGGTCGCGCGCCGGCATCCGACGTTCCCGATCATCCTCGAGACCCTGCGCGAGGTCCTGCAGGACGTGTACGACGTCCCGTCGCTCCTGCGCCTCGCCCGCAGCATCGGCGAGCGCCGCATCCGGCTCGTCGAGACCGAGCCGCCGCAGCCCTCGCCGTTCGCCCGCGACCTGCTCTTCGGATATGTGGGCGCGTTCATGTACGAGGGCGACTCGCCGCTGGCCGAGCGTCGCGCCGCCGCCCTGTCGGTCGACCCGGCGCTCCTCGGCGAGCTCCTCGGGACGATCGAGATGCGGGAGCTGCTCGATCCGGAGGTCATCGCGCAGTTCGAGCGCGAGGCACAGCGCCTGGCTCCCGACCGCCGCGCCCGCGGACTCGAGGGCGTCGCGGATCTCCTGCGCATCCTCGGACCGATGGATGCCGCCGAGATCGCCCTCCGGCTCGAGCCCGCCGAGGGCGCCGACCTGGCCACCGAGGCAGAGGCCCAGACGCTCCTCGACGAGCTGATCACCGCCCGCCGCGCGATCCCCGTCGGCATCGCCGGCACGTCCCGGGTCGCGGTGATCGAGGACGCCGGGCGCCTCCGCGACGCGATCGGCGTCGCTCTCCCTGTCGGCATCCCGAATGCGTTCCTCGAGCCGTTCCCCGATCCGCTCGGCGACCTGGTCGCGCGGCACGCCCGCACGCACGCGCCGTTCACGGCGCAGGATGTCGCCGAGCGCCTCGGGATCGGCGTCGCCGTCGCGCGTCTGACGCTGCAGCGTCTCGAGTCGGCCGGTCGCGTCTCGAGCGGCTACTTCCTCCCCGACGCCGCGCGTACCGCCGGCGCCGGCCGCGCCGCGAACGCCGACGAGGTCGAGTGGTGCGACGCGGAGGTGCTGCGGCGCCTGCGGATGCGCTCGCTCGCCGCGATCCGCGGCAGCGTCGAGCCGGTCTCGCAGCAGGCGTTCGGGCGGTTCCTTCCCGTCTGGCAGCACGTCGCACGCCCGCTCGAGGGCGTCGACGGCGTCCTCGCGGTCGTCGAGCAGCTCGCCGGCGTGCCGATCCCGGCGAGTGCGTGGGAGTCGCTCGTGCTCCCTGCGCGGGTGAAGGACTACACCCCGGGCATGCTCGATGAGCTCACCGCGACGGGCGAGGTCGTCTGGTCGGGTCACGGCAGTCTGGCGGGCCGCGACGGCTGGATCGCGCTGCACCCCGCCGATGCCGCCCCGGTCACGGTCACGCGGGATCCGGATGCCGATGCCCCGGCGCCGGACTCGCTCGACGCGCGGCTCCTGGCGGCGCTCGACGGCGGCGGCGCCTACTTCGCGGGCCAGTTGCGCACCCTCGCGGGAGCGGACAACGAGATGCAGGTCGTCGAGGCTCTGTGGCGTCTCGCGTGGGCCGGGCTCGTGACGAATGACACGTTCGCCCCCGTCCGCGCCCTCGTGTCCGGCGGCGGTCAGGCGCACCGGGTCGCCCGTCGCGCACCACGCGCCCGCATGTACCGCGGCGCGTCGGTCGGGGCGACGCGCACGCCGACGCCGGCCCGCACCCCACCGTCGGGCGGGCGCTGGTCGCGACTTCCCGAGCCCGAGACGGATGCGGCGGTGCGCGCGACCGCCACGGCGAGCCTGCTGCTCGACCGCTACGGCGTCGTCACCCGGGGCTCCGTGCAGGCCGAGGGTGTCCCCGGCGGTTTCGCCCAGGTGTACCGCGTGCTCGCCGGCTTCGAGGAGGCGGGCCACTGCCGCCGCGGATACGTGGTCGAGAAGCTCGGCGCCGCCCAGTTCGCCGCGTCGACGACCGTCGACCGTCTGCGCCAGTTCGCCGGCCTCGCCGATCCGCCCCCGCGGCGCGCGGTGACCCTCGCCGCGACCGACCCCGCGAACCCGTACGGTGCGGCCCTGTCGTGGCCGGCGTTGGAGGGCATCTCCCACCGGCCGGGCCGGAAGGCGGGCGCGCTGGTGGTCCTCGTCGACGGCGCCCTCGTGCTCTATCTGGAGCGGGGCGGCAAGACCGCCCTGGCCTTCGCCGACGACCCCGCCCTCCTCTCCGCCGCGGCCGCCGACCTCGCCACGACGGCGCGCGCCCGACGCCTGGACACCCTGACGATCGAGCAGGTCAACGGCGTCTTCATCCACGGGTCGGAGTGGGGCCGGGCGCTGCGCGAGGCCGGATTCGTCGAGTCCCCCCGCGGTCTGACGCTGCGCCGCCTCACCCCCGGCGAGGCCGATCGCCGGGCACGGTCCACGGCCGACGCGCCGCCCGAGGATCGCGCGCGTGCCTGA
PROTEIN sequence
Length: 1591
MSDVLERFGPATRDWFRGAFAAPTTAQAGAWEAISAGRHALVVAPTGSGKTLSAFLWAIDRVFREKPIPPPEEATGRKKRPRPDDTPATRVLYISPLKALGVDVERNLRSPLVGIEQSARRHGIAVPPVRVGVRSGDTPASERRSLVQDPPDILITTPESLYLMLTSAAGETLRGVHTVIVDEVHAVAATKRGAHLAVSLERLDALLDAPAQRIGLSATVRPIDEVARFLGGAAPVEIVAPRASKAFDMKVVVPVDDMLNPPPAPGSNPPPTAKTADTDAAPIDEDWFGDGSTASPTTEITGSVWPHVEEAIVDRILHQRSTIVFCNSRRLAERLTGRLNEIYAERLGLDLPDPTVPAQMMAQAGATSGADPVLAKAHHGSVSKEQRAIVEDELKSGVLRCVVATSSLELGIDMGAVDLVIQVEAPPSAASGLQRIGRAGHQVGEVSRAALFPKHRSDVLHTAIVTERMLAGKIEAIAVPQNPLDILAQQTVAACALAPLEVETWFETLKRSAPFRALPRSAYEATLDLLAGRFPSDEFAELRPRLIWDRDHGTLTARPGAQRLAVTSGGTIPDRGLFGVFIAGESQNARVGELDEEMVYESRVNDVFTLGTTSWRIVEITHDRVNVLPAFGQPGKVPFWHGDGIGRPAELGEALGKFSREVSAAGPEKAHERLIEAGLDDYARANLLAYLDEQREATGTLPTDRQLTVERGRDEVGDWRVILHSPYGMQVHAPWALAVNARIRERLGVEGSAVASDDGIIARIPDAEAEPPGAELFVFDPDELEQIVTAEVGGSALFAARFRECAARALLMPRRNPGKRTPLWQQRQRSAQLLEVARRHPTFPIILETLREVLQDVYDVPSLLRLARSIGERRIRLVETEPPQPSPFARDLLFGYVGAFMYEGDSPLAERRAAALSVDPALLGELLGTIEMRELLDPEVIAQFEREAQRLAPDRRARGLEGVADLLRILGPMDAAEIALRLEPAEGADLATEAEAQTLLDELITARRAIPVGIAGTSRVAVIEDAGRLRDAIGVALPVGIPNAFLEPFPDPLGDLVARHARTHAPFTAQDVAERLGIGVAVARLTLQRLESAGRVSSGYFLPDAARTAGAGRAANADEVEWCDAEVLRRLRMRSLAAIRGSVEPVSQQAFGRFLPVWQHVARPLEGVDGVLAVVEQLAGVPIPASAWESLVLPARVKDYTPGMLDELTATGEVVWSGHGSLAGRDGWIALHPADAAPVTVTRDPDADAPAPDSLDARLLAALDGGGAYFAGQLRTLAGADNEMQVVEALWRLAWAGLVTNDTFAPVRALVSGGGQAHRVARRAPRARMYRGASVGATRTPTPARTPPSGGRWSRLPEPETDAAVRATATASLLLDRYGVVTRGSVQAEGVPGGFAQVYRVLAGFEEAGHCRRGYVVEKLGAAQFAASTTVDRLRQFAGLADPPPRRAVTLAATDPANPYGAALSWPALEGISHRPGRKAGALVVLVDGALVLYLERGGKTALAFADDPALLSAAAADLATTARARRLDTLTIEQVNGVFIHGSEWGRALREAGFVESPRGLTLRRLTPGEADRRARSTADAPPEDRARA*