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cn_combo_scaffold_8374_8

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(6520..7242)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=22 Tax=Mycobacterium abscessus RepID=B1MJD2_MYCA9 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 205.0
  • Bit_score: 342
  • Evalue 3.30e-91
Um strain SMUC14 PROKKA_contig000018, whole genome shotgun sequence {ECO:0000313|EMBL:KIU39343.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 182.0
  • Bit_score: 346
  • Evalue 2.40e-92
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 205.0
  • Bit_score: 342
  • Evalue 9.20e-92
  • rbh

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Taxonomy

Mycobacterium immunogenum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCAGTTCCGACAGCTTGAGTACTTCGTGGCGCTGGCGCGGGAACGTCACTTCGCGCGAGCGGCATCGGCGTGCTACGTCTCGCAACCCGCACTGTCGGAGGCGATCCGCAAGCTCGAACACGAGCTGGGTGTTCCCTTGGTACTGCGCGGCTCGAACTTTGAGGGCCTGACCCCGGAGGGGGACCGGCTGGTTCTCTGGGCGAGAAGGATTCTCGCGGATCGGGACGCATTGGAGCACGAGGTGACCGCGCTACGCAGCGGCCTCACCGGTGAATTGCGGCTCGGTGTGGTGCCCGGTGCGGCCACGCGAGTCGCACTGATGGCCGACGCATTTTGCGCGGAGCACCCGCTGGTGCGCGTGCGGATCGAGTCCAGCCTGCGGTCCGCGGAGATCCTGGACCGTATCCGCCGGTTCGAACTGGAGGCGGGTGTGGTCTATGACGACGGGTTGCAGACCGATGGGCTGGAGCTGACCCGCCTGTACGAGGAACGTTATGTGCTGGTCGCGGGGGAGGGGTTGTTGCGTGATGCCCCCAAGATCATCATCCATCGAATCGTGCATGGTGGAGATCGCCTTGGGCCGGTGCCATTGACACCGGTACGGGCACCGCGCCCACCGCCGACGACGGTTCGATCCCCCGCCCCGCCGCGTGCGACGAGGAGACCCCCTACATCGCGGTCGCCCTGCCCAACCTCACCAACCCCTACTACGTCGCCATGA
PROTEIN sequence
Length: 241
MQFRQLEYFVALARERHFARAASACYVSQPALSEAIRKLEHELGVPLVLRGSNFEGLTPEGDRLVLWARRILADRDALEHEVTALRSGLTGELRLGVVPGAATRVALMADAFCAEHPLVRVRIESSLRSAEILDRIRRFELEAGVVYDDGLQTDGLELTRLYEERYVLVAGEGLLRDAPKIIIHRIVHGGDRLGPVPLTPVRAPRPPPTTVRSPAPPRATRRPPTSRSPCPTSPTPTTSP*