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cn_combo_scaffold_182_50

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(50292..52784)

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037ACB69 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 832.0
  • Bit_score: 1353
  • Evalue 0.0
RNA helicase {ECO:0000313|EMBL:KEP75662.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 832.0
  • Bit_score: 1310
  • Evalue 0.0
superfamily II RNA helicase similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 832.0
  • Bit_score: 1302
  • Evalue 0.0

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2493
GTGAACGACGCGAGTCCGGCCGAGCGTTACGCGCGCGCACGCGAGCGGAACGAGACCGCGCGATCGTACCCCGACACCGCGGCGTTCGCGGCGGCCCAGCGCTTCGAGCTCGACCCCTTCCAGATCGCCGGGTGCCGCGCCCTGGAGGAGGGACGCAGCGTGCTCGTGGCGGCGCCCACCGGCGCCGGGAAGACCATCGTCGGCGAATTCGCGATTCATCTGGCGATGATGGAGCCGGGTGACAAGGCGTTCTACACCACGCCCATGAAGGCGCTGTCGAACCAGAAGTTCCGCGAGCTGCAGGCGGTGTACGGCGCCGACGAGGTCGGCCTCCTCACCGGCGACACCAACATCAACGGCAACGCCCGCATCGTGGTCATGACCACCGAGGTCCTCCGCAACATGCTGTACGCCGACTCTCCGGCTCTGCGCGGACTGCGTTTCGTCGTGATGGATGAGGTCCACTACCTGGCCGACAGATTCCGCGGCGCCGTCTGGGAAGAGGTGATCATCCACCTTCCGGCGTCGGTGCGCCTGGTCTCGCTGTCGGCCACGGTGTCCAACGCGGAGGAGTTCGGCGACTGGCTCGACACGGTCCGAGGCGACACCGCGGTCATCGTGTCCGAAACGCGGCCTGTTCCTTTGGAGCAGCATGTGCTCGTCCGCGGCGACCTCCTGCCGCTGTTCGATGATCGCGCCGGGGTGGCCACGGCGCAGGTGAACCAGGAGCTGCTGCGGCTTCGCTCGCTGAAGGGGCAGACGTTCGAGCGGAACCGCGATGCGCAGCGCGCCTCCAGTGCGCGCCACGCCGGCGCGGGTCAGCGGCGACCGCATCGGGGAGGTCACCGCGCCGTCCGCCCCTCGACGTCCGCGCGACTGGAGCGCATCGACCGGCCCGAGGTCGTCTCGCTCCTCGGCCGGTCCAACCTGCTCCCCGCGATCTTCTTCATCTTCTCCCGCGTGGGATGCGACGCGGCGGTGCAGCAGGTCCGACGCTCCGGCATCCGGCTGACCACGTCCGAGGAGCGACGCGAGATCCGGGAGATCGTCGAAGAGAGGACGCGCACGCTGCTGGAGGAGGACCTGGCGGTCCTCGGATTCTGGGAGTGGCGGGAGAATCTCGAGCGCGGCGTCGCCGCCCACCACGCGGGACTCCTCCCGGCGTTCAAGGAGGTCGTCGAGGAGCTCTTCCGGCGGAAGCTCGTGAAGGCCGTGTTCGCCACCGAGACCCTGGCCCTGGGGATCAACATGCCCGCGCGCACCGTGGTGCTGGAGAAGCTCGAGAAGTTCAACGGCGAGGCGCGCGTCGCCATCACCTCCGGCGAGTACACCCAGCTCACCGGCCGTGCGGGACGGCGCGGCATCGACGTCGAAGGCCATGCCGTCATCCGGTGGACCGAGGCGATGGACCCGCAGTCCGTGGCCGCGCTGGCCTCACGCCGCACGTACCCACTCAACTCCAGCTTCCGCCCGACCTACAACATGGCGGTCAACCTGATCGACCAGTTCGGACGCGGGCGGGCCCGGGAGATCCTCGAGTCGTCGTTCGCACAGTTCCAGGCCGATCGCGCCGTGGTGGGCCTCGCCCGACGCGTCAAGGAGGAGGAGGAGTCCCTCGCGGGCTATCTCTCGGCGATGTCGTGCGACCGGGGCGACTTCCCCGAGTACGCCGACATCCGTCGTCAGCTCAGCGATCTGGAGAAGCTGAATCGTCGCGACGTCACGGCAGGTCGCGCCACCCGCGATGCGCGCCTGCGGGAGATCGACGCGCTGCGCCGACGGATGCAGCGGCACGCGTGCCACCGGTGTCCGGATCGCGAGAACCACGCGCGCTGGGGGGAACGGTACGCCAAGCTCAAGCGGTCGGTCGACAAGACGCGGCGGCAGATCGAGACCCGCACCGGGACGGTTGCCCGCGTGTTCGACCGCGTCGTGGACGTGCTCGCCGCGCTCGACTACGTCGCCGTCGACGACGGAGGTGCGACGACACTGACGCCGGCGGGGCGCACCATGCGCCGCATCTACGGCGAGCGCGACCTCCTTATCGCCGAAGCACTCCGTCGCGGCCTGTGGCGGCAGATGGATGCGCCGTCGCTCGCGGCCCTCGCCTGCTGTCTGGTCTATGAGCCGCGGCGAGACGACGGCGGGCCCGGGGAGCGCGGTCTGCCGCGCGGAGCCTTCCGCGTGGCGTTCGAGAAGACAACCGAGCTGTGGGCGAACCTCGACGATCTCGAGCGCGATCACCACCTTCCCGGATCGGAGCCGCCCGCGCCGGGGCTGGCCACCGCGATGCACGCCTGGGCTCGAGGCGCCATGCTCGATCGCGTCCTCGCGGACGCCGACATGGCCGCGGGCGACTTCGTGCGCTGGGCGAAGCAGACGATCGATCTCCTCGACCAGCTGTCCCTCGTCGCCGAGCCGGACGTCGCGACGACGGCCCGCCGCGCGCTCGAGTCGGTGCGGCGCGGGATCGTCGCCCACTCGACGGTCTGA
PROTEIN sequence
Length: 831
VNDASPAERYARARERNETARSYPDTAAFAAAQRFELDPFQIAGCRALEEGRSVLVAAPTGAGKTIVGEFAIHLAMMEPGDKAFYTTPMKALSNQKFRELQAVYGADEVGLLTGDTNINGNARIVVMTTEVLRNMLYADSPALRGLRFVVMDEVHYLADRFRGAVWEEVIIHLPASVRLVSLSATVSNAEEFGDWLDTVRGDTAVIVSETRPVPLEQHVLVRGDLLPLFDDRAGVATAQVNQELLRLRSLKGQTFERNRDAQRASSARHAGAGQRRPHRGGHRAVRPSTSARLERIDRPEVVSLLGRSNLLPAIFFIFSRVGCDAAVQQVRRSGIRLTTSEERREIREIVEERTRTLLEEDLAVLGFWEWRENLERGVAAHHAGLLPAFKEVVEELFRRKLVKAVFATETLALGINMPARTVVLEKLEKFNGEARVAITSGEYTQLTGRAGRRGIDVEGHAVIRWTEAMDPQSVAALASRRTYPLNSSFRPTYNMAVNLIDQFGRGRAREILESSFAQFQADRAVVGLARRVKEEEESLAGYLSAMSCDRGDFPEYADIRRQLSDLEKLNRRDVTAGRATRDARLREIDALRRRMQRHACHRCPDRENHARWGERYAKLKRSVDKTRRQIETRTGTVARVFDRVVDVLAALDYVAVDDGGATTLTPAGRTMRRIYGERDLLIAEALRRGLWRQMDAPSLAALACCLVYEPRRDDGGPGERGLPRGAFRVAFEKTTELWANLDDLERDHHLPGSEPPAPGLATAMHAWARGAMLDRVLADADMAAGDFVRWAKQTIDLLDQLSLVAEPDVATTARRALESVRRGIVAHSTV*