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cn_combo_scaffold_242_26

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 20989..21828

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 280.0
  • Bit_score: 408
  • Evalue 7.90e-111
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003704420 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 285.0
  • Bit_score: 415
  • Evalue 3.50e-113
truA; pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 280.0
  • Bit_score: 408
  • Evalue 1.60e-111

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGCGCCTCCGCCTGGACATCTCCTACGACGGCACCCACTTCCGCGGCTGGGCGCGGCAGCCGGGCCTGCGCACCGTGCAGCAGACGCTGGAGGACGCCCTCGCCCGCGTCCTCGGGGGCGAGGTCCGTCTGGTCGTCGCGGGGCGGACGGATGCCGGGGTGCACGCGACCGGGCAGGTGGCCCACCTCGACCTCGACGACGCACAGGCGTCGCGCCTCGCACGCGGGCGCGCGCGGGAGGGAGAGGACGACGGCGGCATCGCTGCTCTCGCGCGCCGCGTCAACGGTGCGCTCGGTGCCTACGCGGACGTCACCGTGCGGCGCGTCCGCCGCGCTCCCGACGGATTCGATGCGCGGTTCTCCCCGGTGTGGCGGCGCTACGAGTACCGCATCGCGGACGACTCCTACGACCCGCTGGAGCGTCACCGCACCACCTTCGTCCGCGGCCGGCTCGACGCCGACGCGATGGATGCCGCGGCCGGGTCGCTCATCGGGCTCCACGACTTCGCCGCCTACTGCAAGCCGCGTGAGGAGGCGACGACGATCCGCACCCTGCTCGCGTTCTCGTGGCGGAGGGACGACGAGGGCGTCCTCCTCGCGCATGTGAAGGCCGACGCGTTCTGCCACAGCATGGTGCGCGCGCTCGTCGGGGCGTGCGTCGCCGTCGGGGAGGGGCGGCTGTCCGTCGACGACGTCGTGCGCATCCGCGACGCCCGTGAGCGGGTGCCGGAGGTGAAGGTCCTCGCCGCGCGGGGCCTCACCCTCACCGAGGTCGGATACCCCGCCGACGAGCTGCTGTCCCTCCGGGCCGAGCAGACTCGGGCCCGCCGCGAGCTCTGA
PROTEIN sequence
Length: 280
VRLRLDISYDGTHFRGWARQPGLRTVQQTLEDALARVLGGEVRLVVAGRTDAGVHATGQVAHLDLDDAQASRLARGRAREGEDDGGIAALARRVNGALGAYADVTVRRVRRAPDGFDARFSPVWRRYEYRIADDSYDPLERHRTTFVRGRLDADAMDAAAGSLIGLHDFAAYCKPREEATTIRTLLAFSWRRDDEGVLLAHVKADAFCHSMVRALVGACVAVGEGRLSVDDVVRIRDARERVPEVKVLAARGLTLTEVGYPADELLSLRAEQTRARREL*